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scnpilot_p_inoc_scaffold_715_25

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(20867..21361)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJJ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 153.0
  • Bit_score: 268
  • Evalue 4.10e-69
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteob similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 153.0
  • Bit_score: 268
  • Evalue 5.80e-69
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 155.0
  • Bit_score: 253
  • Evalue 3.90e-65

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGACAATCGCACTAATCCGATCACACCGCAGGGCCTCGCCGCGCTGAAGGCCCGATACGATCACCTGCTCGGCACCGAGCGGCCTGCCATCGTGGAAATCGTCAGCTGGGCCGCCGGCAATGGCGACCGCAGCGAGAATGGCGATTACCTCTATGGCCGCAAGCGCATGCGCGAAATCGACCGGGAACTGGCCTTTCTCGCGCGGCGCATGAAATCCTCTCGCGTGATCGAGCCTTCCGAACAGACGGACAAGAGCCGCGCCTGGTTCGGGGCGACCGTGACTATTGCTGACGAGGAGGACGAGGAACACACTCTCACTCTGGTCGGCGATGACGAGCAGAACCCCTCCGCTGGAAAGATCGGCTGGAGCGCCCCTATCGCCCGTGCCCTGCGCGGGGCCGCAGTAGGCGACCTGCGCCGCGTGCGCCTGCCCGGCGGGGAAAAGGAATGGGAAGTAGTGGAGATTTCCTACCCCGACGAAAGAGCCTCCTGA
PROTEIN sequence
Length: 165
MDNRTNPITPQGLAALKARYDHLLGTERPAIVEIVSWAAGNGDRSENGDYLYGRKRMREIDRELAFLARRMKSSRVIEPSEQTDKSRAWFGATVTIADEEDEEHTLTLVGDDEQNPSAGKIGWSAPIARALRGAAVGDLRRVRLPGGEKEWEVVEISYPDERAS*