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scnpilot_p_inoc_scaffold_761_47

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 43675..44016

Top 3 Functional Annotations

Value Algorithm Source
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 114.0
  • Bit_score: 219
  • Evalue 1.50e-54
tripartite ATP-independent periplasmic transporter dctq component similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 114.0
  • Bit_score: 219
  • Evalue 4.30e-55
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADU35939.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 114.0
  • Bit_score: 219
  • Evalue 2.10e-54

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGCAAGGCTTGCTCAAGCTTTCCCGGGCCATCGACTGGCTCAATGCCCAGGTGGGCAGATACGCGATCTGGCTGATCCTGGCCGCCACGGTGATCAGCGCGCTCAACGCGGTCGTGCGCAAGATATTCAACACCAGCTCGAACGCGTTTCTCGAAGTGCAGTGGTATCTGTTCGCCTGGTCGTTCCTGATCGCCGCCGGCTTCACGCTGCTGCACCGCGAGCATGTGCGCATCGACGTGATCAACAGCCGCCTGTCCAAGCGCAAGCAGGTATGGATCGACATCATCGGCTTCGCGTTCTTCCTGACGCCGCTGTGCCTCACGGTGCTCTACCTGTCGATG
PROTEIN sequence
Length: 114
MQGLLKLSRAIDWLNAQVGRYAIWLILAATVISALNAVVRKIFNTSSNAFLEVQWYLFAWSFLIAAGFTLLHREHVRIDVINSRLSKRKQVWIDIIGFAFFLTPLCLTVLYLSM