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scnpilot_p_inoc_scaffold_790_7

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(4324..4590)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A400 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 114
  • Evalue 5.40e-23
Putative inner membrane protein {ECO:0000313|EMBL:CCW16504.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 80.0
  • Bit_score: 112
  • Evalue 2.80e-22
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 83.0
  • Bit_score: 77
  • Evalue 2.70e-12

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAACCTTCCTCTCATTGCCGGGCTGACTGCCATCAATGGATGGACCGCCTTTCGTTTCTGGCATGACAAACGCCTGGCGATTGTGGGTGCGCGGCGGATTCCGGAGAGGGACCTGCTGTTCCTTGCCTTTATTGGGGGAACGCCCGGCGCATTCCTTGCCCGGCACCTCTTCCGCCACAAGACGCGCAAGGAGCCATTTTCTACCTATCTGCAACTGATCGGCGTGTTGCAGGCTGGCGGGATCGCAGGCTGGTTCCTGCTCTGA
PROTEIN sequence
Length: 89
MNLPLIAGLTAINGWTAFRFWHDKRLAIVGARRIPERDLLFLAFIGGTPGAFLARHLFRHKTRKEPFSTYLQLIGVLQAGGIAGWFLL*