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scnpilot_p_inoc_scaffold_1269_16

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(16809..17324)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D5I2_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 170.0
  • Bit_score: 251
  • Evalue 5.40e-64
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU74217.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 170.0
  • Bit_score: 251
  • Evalue 7.60e-64
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 166.0
  • Bit_score: 146
  • Evalue 5.30e-33

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCGACGAACTCAATCGCCTTGTCGCGTCTGCTTCAGGCGGAACGCAAATCCCTGCTCCGGCAGGTGCGCCGCCTCGTGGGCGCAGAAAGCGCCGAAGACGTGGCGCAAAAGCTGTGGCTCAAGGTTCAGGCGGTGCGGGATGATCCACCGATCCTCAACCAGAGAGCCTATCTACGCCGCCTCGCGCATAACGTTGCGGTCGATCATGTGCAGGCCGACCGGCGGCAGGCGACGGTGGCGGAGCGAGCCGAAGCGCTGCTGTGGGGCGTCGATTACGAACTGGGGCCCGAACGGATCACGGAATCGCGCGAGACGCTGGACCGGATTTACGCAGCGATCGCCGCACTGCCGGAACCAACGCGGACCATCTTGCGGTTGGTTCGCCTGGAAGGCAGGACGCAGCGCGAGACAGCGGAGGAGGTCGGCGTCACCACAACAACCGTCGAAAATCACCTGCGCCGCGCACTCGCCCAGCTCGGCCGTATTCGCGACGGGGATTTGGACAGCGCGTGA
PROTEIN sequence
Length: 172
MPTNSIALSRLLQAERKSLLRQVRRLVGAESAEDVAQKLWLKVQAVRDDPPILNQRAYLRRLAHNVAVDHVQADRRQATVAERAEALLWGVDYELGPERITESRETLDRIYAAIAALPEPTRTILRLVRLEGRTQRETAEEVGVTTTTVENHLRRALAQLGRIRDGDLDSA*