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scnpilot_p_inoc_scaffold_1269_21

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(23373..23807)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CWP9_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 140.0
  • Bit_score: 129
  • Evalue 2.60e-27
Uncharacterized protein {ECO:0000313|EMBL:KFD25919.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 140.0
  • Bit_score: 129
  • Evalue 2.80e-27
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 144.0
  • Bit_score: 93
  • Evalue 4.50e-17

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GGCGACCCGGTCCTCGCCGAAGATATTGTGCACGATGCCTGGATAAAAACGTGCGAACACGCTTCGCTCAACGAGGTCCATGACTTTGGCGCATACCTTCGCCTTGTGGTCCGTAATCTCGCTATAGATGCAATCCGCAGGCGCCATCGTAGCGCCATTGTCGCAAAATATGGACTAGACGGAAACGCCGAAATGACGGTCGATCCTTCCCCTCTGGCCGATGCCACATTGATCGGAAGGGAAGAACTCGCGCGCTTTCAACAGGCGTTGGAGCTCTTGCCCGAACGGCAACGGATCGCAGTGGAGATGCACAGACTGGGGAATTACAAGCTTCGCGAAATCGCCGATCGTTTCGGCGTATCGGTGGCCTACGCTCAGGAATTGGTTGCCAAGGGCATGGCGCAATGCGCTCGCTACGTGAAGGACGGACAATGA
PROTEIN sequence
Length: 145
GDPVLAEDIVHDAWIKTCEHASLNEVHDFGAYLRLVVRNLAIDAIRRRHRSAIVAKYGLDGNAEMTVDPSPLADATLIGREELARFQQALELLPERQRIAVEMHRLGNYKLREIADRFGVSVAYAQELVAKGMAQCARYVKDGQ*