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scnpilot_p_inoc_scaffold_806_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1039..2019)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C645 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 316.0
  • Bit_score: 390
  • Evalue 1.40e-105
  • rbh
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 322.0
  • Bit_score: 377
  • Evalue 3.50e-102
Tax=BJP_IG2102_Porphyrobacter_62_18 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 323.0
  • Bit_score: 408
  • Evalue 7.10e-111

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Taxonomy

BJP_IG2102_Porphyrobacter_62_18 → Porphyrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGATCCACTCACGAGAAAGCGGCGTCTATCTCGACAGTTTTCTGGCGCCGCTGGCGCCATTTCTTGCCGAGACAAATGTCACGGATATTTTCGTGAACAAGCCGCAGGAAGTCTGGGTTGAGCGCCTTGGCGGCGGGATCGAGAAGCATGCCTGTCCGGCCCTGACTGAACCGGTGCTGATGCGCCTTGCCCGGCAGATCGCGGCGCGCAGTTCGCAGGGGATCAGCCGTGAACATCCGCTGCTGGCGGCCAGCCTGCCGGATGGAGCACGGGTGCAGATCGTGGCCCCGCCGGCAACGCGTGGACATCTCGTGATGGCGATCCGCAAACATGTGGCAGCAAAGCTCTCGCTCGCCGATTATGCCCAGGGCGGTGCATTCGAGGGGCTCGAGCCTGTTGTGAAAGGGCTCGACGGGAACCCCGGCTTTGCAGGGGTCGGGGGAGAAGAGGCTTTCCCGCTTCTGGCCGAAGCAGTGCGCGAGCGGCGCAATGTCCTGATTTCTGGAGGGACCTCGTCGGGCAAGACAACCTTCCTCAATGCGCTGCTGCGCGAGATTCCTGAAGAAGAGCGCCTGATTCTAATCGAGGATACGCCGGAACTTGATCTGACCCATGAGAACTCTGTCGGACTTCTGGCTGCGCGCAGCGCGCTCAGCGAAACAGCCTTGAGTGCGGAAGACCTGCTCATCGCCGCGCTGCGTATGCGGCCTGACCGCATCATCCTTGGCGAACTGAGGGGAAGGGAAGCCTATACCTTCCTGCGTACGGTCAACACCGGACACCCGGGCTCAATGACCACCATTCATGCAGATTCCCCCATGCGGGCCATCGAGCAACTGGCCTTGCTTGTCCTTCAGTCAGGGGCGGAACTGCGCTGGGACGATGTGCTGAACTACGTCCGCTCGAGCATTGACGTTTTTGTTCAGCTTGAGCGCCGAAATGGTCAGCGGAGGGTCACCAGCCTCATGGTGCGTGCGTGA
PROTEIN sequence
Length: 327
MIHSRESGVYLDSFLAPLAPFLAETNVTDIFVNKPQEVWVERLGGGIEKHACPALTEPVLMRLARQIAARSSQGISREHPLLAASLPDGARVQIVAPPATRGHLVMAIRKHVAAKLSLADYAQGGAFEGLEPVVKGLDGNPGFAGVGGEEAFPLLAEAVRERRNVLISGGTSSGKTTFLNALLREIPEEERLILIEDTPELDLTHENSVGLLAARSALSETALSAEDLLIAALRMRPDRIILGELRGREAYTFLRTVNTGHPGSMTTIHADSPMRAIEQLALLVLQSGAELRWDDVLNYVRSSIDVFVQLERRNGQRRVTSLMVRA*