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scnpilot_p_inoc_scaffold_806_26

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 34975..35223

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW81_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 75.0
  • Bit_score: 121
  • Evalue 3.10e-25
Helix-turn-helix protein {ECO:0000313|EMBL:ENY82680.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 75.0
  • Bit_score: 121
  • Evalue 4.40e-25
helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 71.0
  • Bit_score: 77
  • Evalue 2.50e-12

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGACGTTCACAAGCGCATAGGTTGGAATCTCAGGCGACTGCGGAAGGAGCGGGAGATCACCCAAGAGGATTTCGCGACCGATAGCGGATTCGATCGCGGGTATATCAGCGGCGTGGAACGCGGAGTGCGCAATCCGTCGGTGAAGGTGCTCGTCAGGATCGCGGATGCTTTGAAGGTCGACGTCGCCGAACTGTTCGATGCGGAGAAGGCAACGGAATTTGCTGGCAGGCACCATGTCGAAGCATAG
PROTEIN sequence
Length: 83
MDVHKRIGWNLRRLRKEREITQEDFATDSGFDRGYISGVERGVRNPSVKVLVRIADALKVDVAELFDAEKATEFAGRHHVEA*