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scnpilot_p_inoc_scaffold_809_16

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 10460..11581

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD2 component n=3 Tax=Sphingomonadaceae RepID=G2IU40_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 373.0
  • Bit_score: 738
  • Evalue 2.40e-210
  • rbh
type IV secretory pathway VirD2 component similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 373.0
  • Bit_score: 738
  • Evalue 6.90e-211
  • rbh
Type IV secretory pathway VirD2 component {ECO:0000313|EMBL:BAK68715.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 373.0
  • Bit_score: 738
  • Evalue 3.40e-210

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGCGTGAGGAGGAGGGGGTTCTCCCGCTTCCCAGCCTGATGGAGGCCTGGCGGCCGCCGGCAGGCGGCAAGCGGACCCTGCGCGGCGCTTATGTTCGGATCAAACCGGGCGGAAGCGGGGGCGGGGCCGCCCGGCCGATGTCGATGGACCAGGCCGAGGCGCGCGCCAAGCTCGAGCGGATCGTGCGCAAGGCGCCCGAGGTGATGGTGAAGGTCTCCGGCAAGCAATATGGCGCTCATCATGTCGCCGAGCATTTCGGCTATGTGGCGCGCCACGGGAAGCTCGCCGTCCAATCGAGCGAGGGCGAGATTATCACCGAGCCGGATCGGCTCAAGGCGATCGCTCAGGACTGGGCGATGCTCGACGAGGCCATGAACGAACATGGCCGGGAACGGCCGACGTCCATGTCGCTGGTGCTGTCGATGCCTGGGGGATCGACCGACGCCGAGACGCTCCATGATGCGGCGCAGGCATTCGCGCGAATCCTGTTCGAGGGGAACCATGCCTATATGCTGGCGCTCCATACCGACACCGATCATCCCCACGTCCATCTGACGGTGGCGACCGAAGGGGCGGACGGAACCCGCTTCAATCCGCGCAAGGCGGATCTCCATCATATGCGTGAGACCTTCGCGCATGAGCTGCGCGCGCGCGGTGTCGCGGCGGAAGCGACACCCCGGCGGGCGCGCGGTCATGTCCAGAAGCGCGTGCGGTCAGCCGCGCTCCATCTCGATGCCCGGCTTGGGGCCGAGGGGCGCAGGCTCAATCTCGCGCAGCTCAACGAACTGCGGGCGCAAAGCTTCGTGCGTGCGGCCGACCAGGAGCGCCGGCCGGAAGATGTCATGGCGCTGGCGCGCCAGAAGCAGATCCGCGGCGCCTATGCCGAGGCCGCCGTCGCGCTCGCCGCCACCGGAAAACCGGAAGATCGGGCCTTGGGGCAGGAAATCGCCGGCTTTCTGGCGGCGATGCCGCCGGCGGTGTCGCGGCGGCTCGCGCGCGCACGGGAGATACTGCAATCCGAGCGGCCGCCGCAGGAGCGCCGAAACGAGCCGGAGGGCGTTTCGCCGCCCACAGGTGCGGACGAGGGGCGGCCACCGCCTCACCGGGATCGGGAACGATGA
PROTEIN sequence
Length: 374
MREEEGVLPLPSLMEAWRPPAGGKRTLRGAYVRIKPGGSGGGAARPMSMDQAEARAKLERIVRKAPEVMVKVSGKQYGAHHVAEHFGYVARHGKLAVQSSEGEIITEPDRLKAIAQDWAMLDEAMNEHGRERPTSMSLVLSMPGGSTDAETLHDAAQAFARILFEGNHAYMLALHTDTDHPHVHLTVATEGADGTRFNPRKADLHHMRETFAHELRARGVAAEATPRRARGHVQKRVRSAALHLDARLGAEGRRLNLAQLNELRAQSFVRAADQERRPEDVMALARQKQIRGAYAEAAVALAATGKPEDRALGQEIAGFLAAMPPAVSRRLARAREILQSERPPQERRNEPEGVSPPTGADEGRPPPHRDRER*