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scnpilot_p_inoc_scaffold_816_16

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 14996..16228

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 412.0
  • Bit_score: 616
  • Evalue 2.20e-173
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 419.0
  • Bit_score: 596
  • Evalue 6.10e-168
Pseudouridine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVM4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 412.0
  • Bit_score: 616
  • Evalue 1.50e-173
  • rbh

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGAAGCCGGCGGATGAAGTACGCCAGTTCACCGTCGGGGCCGACGATGACGGCATCCGGCTGGATCGCTGGTTCAAGCGCCACCTGCCGCAGGTCGGCTTTGCCACCGTATCGCGCTGGGCCCGCACCGGGCAGATTCGCGTGGATGGCAAGCGCGCCAAGCCTGAAGACCGGCTGAGCGCCGGCCAGGTGCTGCGCGTGCCGCCGGGCGGAGAGGCTCCCACTGGCAAAACGCCTCGCCCCCGCCGCGAGCTGAGCGAGGACGAAGTGGCCCGGGCGGAAGCCATGGTCATCACGCAGGATCGTTCGGCCATCGTCCTGAACAAGCCGCCGGGCCTTGCAACGCAAGGCGGCACCAAGATGAAGGACCATGTGGACGGCCTGCTGGACGCCTTTGTGCGCGGTGAAGAGGCTCGCCCGCGTCTGGTCCACCGGCTGGACAAGGATACCAGCGGCGTGCTGCTCGTGGCGCGCACGCCGGGCAGCGCGGCGTTCTTCTCCAAGCGATTCTCGGGCCGCTCCGCCAAGAAGGTCTATTGGGCGCTCGTCATGGGTGTGCCCGATGTGCTGGAAGGCACGATTGAGGCCCCAATTGCAAAACAGCCCGGCACGGGCGGCGAGAAGATGCATGTGGACGAGGAAAACGGCCAGCCGGCCAAGACCCGTTACCGCGTGATCGATCGCGCGGCCAAGCGCGCCGCCTGGGTAGAACTGCAGCCGCTGACGGGCCGCACGCACCAGCTTCGCGTTCATATGGCGGCTATCGGCCATCCCATCGTGGGCGATGGCAAATATGGCGGGCCAGAGGCTTTCCTGACCGGCAGCATCAGCCGCAAGATGCACCTCCATGCCCGGCGTCTGATCATCGACCATCCCGATGGCGGCAAGCTGGACGTAACGGCCGAATTGCCCGCCCATTTCGCCACGAGCATGGAGCAGTTGGGCTTCGATCTTTCGCTGAGCGATGCGCTGCCCGAGGATGACACGCCTCCGCCCTCGCGGACCGAAAAGAAGCAGATCGCCAAGGCCCACGCCAAGCAATATCGCAAGGAACGGCGCGGAGAACGGCGCAAGCGCGGCCCTTCCGATGATGTATCGCCCCGCCGGGGCAAACCTGCACCCGCTGGAAAGGCCGGCGCCCGATCATCGGGTACGAAGTCGGGCCCGAAGCCTGCTGCGCGCCGCCCTGGTGCCAAACCCGCCGGAAAGCCGGGGCCCAGGGGCCGCAAGTGA
PROTEIN sequence
Length: 411
MKPADEVRQFTVGADDDGIRLDRWFKRHLPQVGFATVSRWARTGQIRVDGKRAKPEDRLSAGQVLRVPPGGEAPTGKTPRPRRELSEDEVARAEAMVITQDRSAIVLNKPPGLATQGGTKMKDHVDGLLDAFVRGEEARPRLVHRLDKDTSGVLLVARTPGSAAFFSKRFSGRSAKKVYWALVMGVPDVLEGTIEAPIAKQPGTGGEKMHVDEENGQPAKTRYRVIDRAAKRAAWVELQPLTGRTHQLRVHMAAIGHPIVGDGKYGGPEAFLTGSISRKMHLHARRLIIDHPDGGKLDVTAELPAHFATSMEQLGFDLSLSDALPEDDTPPPSRTEKKQIAKAHAKQYRKERRGERRKRGPSDDVSPRRGKPAPAGKAGARSSGTKSGPKPAARRPGAKPAGKPGPRGRK*