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scnpilot_p_inoc_scaffold_816_23

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(21716..22663)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter periplasmic protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLW4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 315.0
  • Bit_score: 406
  • Evalue 3.20e-110
  • rbh
Putative ABC transporter periplasmic protein {ECO:0000313|EMBL:GAD49407.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 315.0
  • Bit_score: 406
  • Evalue 4.40e-110
mammalian cell entry protein similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 315.0
  • Bit_score: 388
  • Evalue 2.50e-105

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGGAAACGCGCGCGAACCATGTCTGGGTTGGGGCAGTCACCCTGTTTCTGCTGGCGGCGCTGGCGGCCTTTATCATGTGGATCGCCGGGCTCAGCGGCGCGCAGAAGAAGGAATATGACATCTTCTTCAAACAGTCGGTAGACGGGTTGGCGCGCGGATCGAACGTCACATTCTCCGGCGTGCCGGTGGGCGAGATTTCGGAAATCGAACTGTGGCCGCGCAACCCGGAATATGTCCGCGTGCGCATCAGGGTGGGCAAGGATGTGCCGATCCTGGTAGGAACGGTGGCCACCGTGCAGTCCAGCTTCACCGGATCGTCCAAGGTCCAGCTCGACGGCGCGCGGGAAGGCGCGCCGGAAATCACCTGCCAGAACACCAGTTGCCTTGAAGGCAAGCCCACCATCGCCGCCAAGCCGGGTGGGTTGGGGGAAATCCTGTCCAATGCGCCGCTGCTGCTGGAACGTCTGGCTACGCTGACCGACCGGCTGACCCAGCTGCTGTCGGATGACAATCAGGCCTCCATCGCGGGTATCCTCAAGAATACCGAACGGCTGACCGATCACGTGGCCGATGCCTCGCCCCAGATCCAGGCGACGCTCACTGAATTGCAAGCGACCCTGCGCCAGGCATCGGGCAGCCTTGCCGCCTTTGAAAAGACCATGGGCACTGCCGATGGCTTGCTGAAGAAGGATGGGGAGCAATTGGCTGGCCAACTGCGCGATACGCTGAAATCGGCCAAGCTGGCGGCGGAATCGCTGGATACAACGCTCAAGACGGCGCAGCCCGCCACGCGACAGCTTTCGGAAACGACCCTGCCGGCGGCCGAGGCCACTCTGCGCGATTTGCGTGAGGCGAGCGCGGCGCTGCGCAAGATCACCGAGAAGATCGACAATCAGGGCGCAGGCGCGCTGTTGAAAGGCAACGACCTGCCGGATTACAAGCCATGA
PROTEIN sequence
Length: 316
METRANHVWVGAVTLFLLAALAAFIMWIAGLSGAQKKEYDIFFKQSVDGLARGSNVTFSGVPVGEISEIELWPRNPEYVRVRIRVGKDVPILVGTVATVQSSFTGSSKVQLDGAREGAPEITCQNTSCLEGKPTIAAKPGGLGEILSNAPLLLERLATLTDRLTQLLSDDNQASIAGILKNTERLTDHVADASPQIQATLTELQATLRQASGSLAAFEKTMGTADGLLKKDGEQLAGQLRDTLKSAKLAAESLDTTLKTAQPATRQLSETTLPAAEATLRDLREASAALRKITEKIDNQGAGALLKGNDLPDYKP*