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scnpilot_p_inoc_scaffold_1207_5

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3236..4132)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB192 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 293.0
  • Bit_score: 434
  • Evalue 1.00e-118
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AJR23585.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 293.0
  • Bit_score: 446
  • Evalue 3.70e-122
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 291.0
  • Bit_score: 349
  • Evalue 7.20e-94
  • rbh

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGACAGGTTCGAATCCCTTGCCGCTTTCGTCGCCGTCGCAGACAAGCGCAGCTTTGCGGCGGCGGCGCGTGTCCTCCAGGTTTCCCCGCCTGCCATCACCCGGGCGATTGCGGCGCTGGAGCGACATCTGGGCGTCACGCTGTTTCATCGCTCCACCCGCTCCGTTTCGCTGACGGACGATGGCGCCGCTTTTCTGGACCGGGCGCGCCGTATCCTGATCGATCTGCGGGAGGCGGAGCATATCGTCATGGGCGGCAGATCGGTGCCGCGCGGGCAGATATACATCACTGCCCCCGTGATGTTCGGCAAGCTGCATGTCTTGCCAGTCGTCAGCGAATTGCTGGCCGAGCATCAGGGGCTGAGCGCGCGTATGATGCTGCTCGATCGCAATGTGCGCATCGTGGAGGAAGGTATCGACGTGGCCGTGCGGATCGGTGCGCTGAGCGACAGCAACTTGCGCGCGATACAGATAGGGTCGGTTCATCAGATGATTGTCGCTAGTCCGGCCTATCTTGCAGAACACGGCATGCCGGCTTTGCCTGCCGATCTGGCGGATCATCGTTGCATTGCGGGCAGCGGCGTGCGTGCCGGGAGCGTCTGGCCATTCGGAGCAAAGGGCGAAACCGTGGCGAATGTAGTTCCCCGCCTCACCGTCAACACGGTGGACGCCACATTGGCCGCCGCCGAGGCGGGGCTCGGCATCGCGAATCTGCTGAGTTACCAGACGGAGTCCGCCATTGCCGCGGGCCGCCTTGTGCGCGTGTTGGCCGATCATGCGCCTCTGCCGCTTCCAGTCAGTCTGCTGTTCGAAGGGGGACGTGCGGCGATGCCGGCAGTGCGGCTGTTTATCGAGGCAATGAAAGAACGGGGGCAAGAGCTGACAGCGCAAAGATGA
PROTEIN sequence
Length: 299
MDRFESLAAFVAVADKRSFAAAARVLQVSPPAITRAIAALERHLGVTLFHRSTRSVSLTDDGAAFLDRARRILIDLREAEHIVMGGRSVPRGQIYITAPVMFGKLHVLPVVSELLAEHQGLSARMMLLDRNVRIVEEGIDVAVRIGALSDSNLRAIQIGSVHQMIVASPAYLAEHGMPALPADLADHRCIAGSGVRAGSVWPFGAKGETVANVVPRLTVNTVDATLAAAEAGLGIANLLSYQTESAIAAGRLVRVLADHAPLPLPVSLLFEGGRAAMPAVRLFIEAMKERGQELTAQR*