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scnpilot_p_inoc_scaffold_1207_8

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(5251..5580)

Top 3 Functional Annotations

Value Algorithm Source
HxlR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B360D4 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 95.0
  • Bit_score: 156
  • Evalue 1.20e-35
hxlR-like helix-turn-helix family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 94.0
  • Bit_score: 155
  • Evalue 3.60e-35
Transcriptional regulator, HxlR family similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 91.0
  • Bit_score: 131
  • Evalue 1.10e-28

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Taxonomy

R_Alphaproteobacteria_63_12 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGACCATCACGCCGATATAATCGAAGGTTGGCATTGCCCGGCGGAGCTGGCGCTCGATTTCCTGTCGGGCAAATGGCGCCCCATGGTGATCTATTGGCTGCTGGAAGGGCCGCTGCGCTTCAACGAATTGCAGCGCAGGCTGGGCGGGATCACTCATCGCACCCTTTCAAGAACACTCAAGGAAATGGAGGCGGATGGCCTCGTCGCCCGCACGGATTACGGGGAAATCCCACCTCGTGTGGATTATGCGCTCACACCGAAGGGGGCGAGCCTTCAGCCCGTGTTGATGGCGCTGGAGGCATGGGCTCGATCGAACAGGCTTGGATAG
PROTEIN sequence
Length: 110
MDHHADIIEGWHCPAELALDFLSGKWRPMVIYWLLEGPLRFNELQRRLGGITHRTLSRTLKEMEADGLVARTDYGEIPPRVDYALTPKGASLQPVLMALEAWARSNRLG*