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scnpilot_p_inoc_scaffold_1207_20

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 17512..19260

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase RhlE (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 509.0
  • Bit_score: 668
  • Evalue 1.80e-189
Putative helicase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIU8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 603.0
  • Bit_score: 689
  • Evalue 2.60e-195
  • rbh
Putative helicase {ECO:0000313|EMBL:GAD48072.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium t similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 603.0
  • Bit_score: 689
  • Evalue 3.70e-195

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1749
ATGTCCTATTTCACTGAGCTTGGCTTGGCCGAGCCTATCCTTCGTGCATTGAACACGAAGGGTTATTCCGATCCCACGCCGATCCAGCGCCAGGCGATTCCCGCCCTGCTGGAAGGGCGCGACCTGCTCGGCATCGCCCAGACCGGCACCGGCAAGACGGCAGCCTTCTCCCTGCCTTCCCTGCACCGCCTGGCCGAGAATCCGGTTGGCCGCTTCAACGCTGGCTGCCGCATGCTGGTGCTTTCGCCCACGCGCGAACTGGCCGCCCAGATCGCCGAGAACATCAAGCAATATGCGCGCTTCCTGGACCTTTCGGTGCAGTGCGTGTTCGGCGGCGTGCCCGTGGGCAAGCAGGCCCGCGCCCTGATGCGCGGCTGCGACATTCTGGTCGCCACGCCGGGCCGTCTGCTCGACCTGATCGACCAGCGCGCCCTGACGCTGCGCCATGTCGAAATCTTCGTGCTGGATGAAGCCGACCAGATGATGGATCTGGGCTTCATCAAGCCGCTGACCCGCGTTGCTGCCCTGCTGCCCGAAAAGCGCCAGAGCCTGTTCTTCTCGGCTACCATGCCCAAGGCGATTGCCGAACTGGGCAAGCGCTTCATTAAGAACCCGGTGCGCGTGGAAGTGGCCCCGCAGGCCACCACCGCCGAACGGGTGGAACAATATTCCACTTTCGTGGACCAGAAGGAAAAGCAAGCCCTGCTGACCCTGCGTCTGCGCGAAACGCTGAACGATGGCAGCCTGGAACGCACTATCGTGTTCACCCGCACGAAGCATGGGGCGGACCGCGTGGTGCGCCACCTTTCCGCAGCCAGCATCGATTCGGCCGCGATCCACGGCAACAAGAGCCAGGCCCAGCGCATCCGCGCGCTGGAAAGCTTCCGTCAGGGCCATGTGAAGGTACTGGTGGCGACCGACATCGCCGCACGCGGCATTGACGTTTCGGGCGTGAGCCACGTGTTCAACTTTGAACTGCCCAATGTGCCGGAACAATATGTCCACCGCATCGGCCGCACGGCGCGCGCCGGTGCCGACGGTATCGCGATGAGCTTCGTCGCGCCCGACGAAAAGGCCTATCTGCGTGACATCGAGAAGCTGACCGGCGTCAAGCTGACCCCGATGCCCTTGCCGGAAAGCTTCCGCACCGAAATGGCCCGCCTGCCCCTGCCCGCCCGCGCAAAGCCGGAAGACGAACGCGAAGAAGGCCGCGGCGATCGCCGCAATTCGCGTGACGGACGCGGCCAGCGCCGGGGCGGCGAAGGTCGCAGCGAGAACCGGGGCGAGCGTCGGGGTGGTAATGGTGGCGGAAACGCCAATGGCGGCGGACAGCGCCGCGATGCCGAACGCCGCGAAGCGGCCCGCAAGTTCATCACTCCGCGTCATCCCTGGCCCAATTCCGACGAAGCACGTGAAGCCAAGTCCGGCCGGGACGGCCAGCGTCAGGGCGGCAGCCGCAATGGCGGGAACAATCGCGGCTCGGCCCCCAGTTCGCGCGAGGGCGCCCGTTCCGCCGATCCGCGCCGCGACAATCGCCATGGCGAACAGCGCGGGGAGGCTCGCGCCGACAACCGGGGCGACCGCCGCGAGGCTCGCCCGGATCACCGCGGCGAACGCCGTCAGGGCGAGCAGCGCCACGGCCATGGCGGCCAGGCGCGTAATGGTCAGTCCCATAATGGACAGGGTCGCGGTCCGCGTACCGAAGGCGGCCAGCGTCCGCAGCGCCGCCAGGCCCCGCGCCAGGGCTGA
PROTEIN sequence
Length: 583
MSYFTELGLAEPILRALNTKGYSDPTPIQRQAIPALLEGRDLLGIAQTGTGKTAAFSLPSLHRLAENPVGRFNAGCRMLVLSPTRELAAQIAENIKQYARFLDLSVQCVFGGVPVGKQARALMRGCDILVATPGRLLDLIDQRALTLRHVEIFVLDEADQMMDLGFIKPLTRVAALLPEKRQSLFFSATMPKAIAELGKRFIKNPVRVEVAPQATTAERVEQYSTFVDQKEKQALLTLRLRETLNDGSLERTIVFTRTKHGADRVVRHLSAASIDSAAIHGNKSQAQRIRALESFRQGHVKVLVATDIAARGIDVSGVSHVFNFELPNVPEQYVHRIGRTARAGADGIAMSFVAPDEKAYLRDIEKLTGVKLTPMPLPESFRTEMARLPLPARAKPEDEREEGRGDRRNSRDGRGQRRGGEGRSENRGERRGGNGGGNANGGGQRRDAERREAARKFITPRHPWPNSDEAREAKSGRDGQRQGGSRNGGNNRGSAPSSREGARSADPRRDNRHGEQRGEARADNRGDRREARPDHRGERRQGEQRHGHGGQARNGQSHNGQGRGPRTEGGQRPQRRQAPRQG*