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scnpilot_p_inoc_scaffold_1207_28

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 27131..27928

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2B0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 265.0
  • Bit_score: 477
  • Evalue 1.20e-131
  • rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAD48878.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 265.0
  • Bit_score: 477
  • Evalue 1.70e-131
two-component system LytT family response regulator similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 265.0
  • Bit_score: 462
  • Evalue 1.20e-127

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACCATCCGCACAATCCTCGTCGATGACGAGAAACTCGCCATCCAGGGCCTGCAATTGCGGCTCCAGGATTTTCCTGACGTCGAAGTGATAGACACTTGTGCCAATGGGCGCGAGGCCATCCGCAAGATCAAAACGGAAAAACCCGATCTGGTCTTCCTCGACATCCAGATGCCCGGTTTTGACGGATTTTCCGTGGTGAAGGGCGTGATGGAAATCGAACCGCCGCTGTTCGTATTCGTCACGGCCTTCCAGGAACACGCCATTCGTGCTTTCGAAGCGAATGCGGTGAACTATCTGATGAAGCCGGTCGATGTGGACAAGCTGGCTGACACGATGGAGCGCGTGCGCACCCGTCTTGCCGAGAAGCGCTCTGCCGAAGAGGCTGAGAAGCTCAAGGAAGTGCTTGCCGAAGTCGCCCCCGATGCGGTCGAGAACCTCGTCGAGGAAGATGACGGCGCCGCTTCCCGCTATGAAAAGCTCATCAACGTCAAGGATCGGGGCCAGATCTTCCGCGTGGACGTGGATTCGATCGAGCATATCGAAGCCGCTGGCGACTATATGTGCATCTATACCGGCGACAATTCGCTGATCCTGCGGGAAACCATGAAGGATCTCGAACGCCGGCTGGACCCTCGCACATTCCAGCGCGTGCATCGCTCCACCATCGTCAATCTCGACAAGGTGCGGCAGGTGAAGCCCCACACCAATGGCGAATGCTTCTTGGTGCTGGAAAGCAGCGCGCAGGTGAAGGTCAGCCGATCCTATCGCGATGTAGTGGCCCGCTTCGTACACTGA
PROTEIN sequence
Length: 266
MTIRTILVDDEKLAIQGLQLRLQDFPDVEVIDTCANGREAIRKIKTEKPDLVFLDIQMPGFDGFSVVKGVMEIEPPLFVFVTAFQEHAIRAFEANAVNYLMKPVDVDKLADTMERVRTRLAEKRSAEEAEKLKEVLAEVAPDAVENLVEEDDGAASRYEKLINVKDRGQIFRVDVDSIEHIEAAGDYMCIYTGDNSLILRETMKDLERRLDPRTFQRVHRSTIVNLDKVRQVKPHTNGECFLVLESSAQVKVSRSYRDVVARFVH*