ggKbase home page

scnpilot_p_inoc_scaffold_926_20

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(20071..21294)

Top 3 Functional Annotations

Value Algorithm Source
Predicted permease n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE90_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 411.0
  • Bit_score: 594
  • Evalue 1.10e-166
  • rbh
Lipopolysaccharide export system permease protein LptF {ECO:0000313|EMBL:AKH42596.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altere similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 400.0
  • Bit_score: 604
  • Evalue 1.10e-169
permease similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 407.0
  • Bit_score: 586
  • Evalue 8.10e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
GTGAAGTTCCTCACCGCCATCGACCGCTACATCTTCCGGCTGGTGCTGACGCCGATGCTGGCCGTCTTCGTGATCGCCGCTTCGCTGCTGGTGCTCGACAAGATGCTGCGCCTGTTCGACTTCGTTGCGACGGAGGGCGGCCCGGTCGGAATCGTGTTCAAGATGCTGGCCAATCTCCTGCCGGAATATGCCAGCCTTGCGATCCCGCTGGGGCTGATGCTGGGCATCCTGCTGGCCTTCCGCACATTGGCGACTTCCAGCGAACTGGACGTGCTGCGCGCGGTGGGCCTTGGTTATACCCGCCTGTTGCGGGTGCCCTATATGATCACGCTGGTTCTGGTGGGGCTGAACTTCGCCATTGTCGGCTACCTCCAGCCTTACGCCCATTATTATTACGCGGAACTGCAGCACGAATTGCGGACCGGCGCGCTGGGCGCGTCGATCAAGGTGGGTGAGTTCACTACGCTCGAAGACCGCATGGCCCTGCGCATCGAGCGGAGCGAGGATGAGGGAACGCGGCTGATCGGCATCTTTGCCCGCGTCTCCGACGAAAAGGGGCAGGTCCTCTCCATCTCCGCGCGCGAAGGGCGTTTTCTCGCCAATAAGGAAAACCGGGATACGATTATCCTACGGCTGACCGATGGCACGATTGTTCAGGACACCAACGGCACTACTCCGCGCGTACTGAGCTTTTCCGCCCATGACCTGCCGATTGACCTGCCGGCAATCGAGCAGTTCCGCCAGCGCGGCGGGGAGGATAAGGAATATATCCTGCCTGAATTGCTGCGTATCGGCTGGGCGCCGGATTCCTCCAGCACCGATCGCGCGGTGGGGCAGGCGAGCTTCAATTATCGCATGGTAGAAGTGGTGATGATGTTGCTCCTGCCGCTGCTGGCGGTTGCCCTGGCGATCCCGCCCAAGCGCTCCACTTCCTCGCTCGGCGTGTTCGTCTCCATCGTGATGGTGGTCGCCTATCACAAGGTGAACCAATATGGGCAGTCCGTGGCCGCGCTTGGCCGGGTCGATCCCGTCCTGGCCCTGTGGGGGCCCTTCGTGATCTTCGCCGCGCTGATCCTGTGGATGTATTACCGCGTGGCCTACGTGCCGGGCGCGCAGGCCATCGGCGCGCTGGAAACGATGTTTGCCAAGCTGATGAAGCGGTTCAAGGCCCTGGCCCGCAGGCGCCATTCCCAACAGATGAAGGCGGCCGGCGATGCGGCTTGA
PROTEIN sequence
Length: 408
VKFLTAIDRYIFRLVLTPMLAVFVIAASLLVLDKMLRLFDFVATEGGPVGIVFKMLANLLPEYASLAIPLGLMLGILLAFRTLATSSELDVLRAVGLGYTRLLRVPYMITLVLVGLNFAIVGYLQPYAHYYYAELQHELRTGALGASIKVGEFTTLEDRMALRIERSEDEGTRLIGIFARVSDEKGQVLSISAREGRFLANKENRDTIILRLTDGTIVQDTNGTTPRVLSFSAHDLPIDLPAIEQFRQRGGEDKEYILPELLRIGWAPDSSSTDRAVGQASFNYRMVEVVMMLLLPLLAVALAIPPKRSTSSLGVFVSIVMVVAYHKVNQYGQSVAALGRVDPVLALWGPFVIFAALILWMYYRVAYVPGAQAIGALETMFAKLMKRFKALARRRHSQQMKAAGDAA*