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scnpilot_p_inoc_scaffold_1706_12

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 9628..10644

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 341.0
  • Bit_score: 458
  • Evalue 6.20e-126
tRNA pseudouridine synthase B n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JCG4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 341.0
  • Bit_score: 458
  • Evalue 4.40e-126
  • rbh
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 340.0
  • Bit_score: 438
  • Evalue 1.30e-120

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAGCGTCCATGGCTGGATCATTCTCGATAAGCCGGTTGGGCTTGGCTCCACTCAGGCTGTGGGGGCAGTGAAGCGTAACATGCGTGAGGCAGGCTATGGCAAGGTGAAGGTGGGCCATGGCGGCACGCTCGATCCGCTGGCCGAAGGCGTGCTGCCCATCGCGCTGGGCGAGGCGACCAAGCTGTGCGGGCGGATGCTGGATGCCAGCAAGATCTACGATTTCACGATCCGCTTCGGGGAACAGACCGACACGCTGGATGCCGAGGGACAGGTGATCGCCACGAGCGAGGCCCGGCCAACTCTGGCCCAGCTGGAGGCGGTGTTGCCGCGCTTCACCGGCCAGATCGATCAGGTGCCGCCTGCCTATTCGGCGCTCAAGGTGGATGGAAAGCGCGCCTATGACCTCGCCCGGGCGGGGGAAGAGGTTGAGCTGAAGGTGCGGGCGGTGACGGTTTATGCCCTCTCGATCCTCCCCGAACGGGGGAGGGGGACCATGCACAGCATGGTGGAGGGGCAGGTGCCGGATGGTGCTTCGCTGACCGGTTCAGGCCCGCCGCAGGTGCCCCTCCACCGTCCTTCGGACGGTCCCCCTCCCCGTGCCGGGGAGAATCTGCCCGAAATCACCCTGACCGCCCATGTCTCCAAGGGCACCTATATTCGCAGCCTCGCGCGTGATATAGCACTGGCGCTGGGCACGGTCGGCCATGTCACCATGCTGCGCCGGGTAAAGGCGGGGCCGTTCACGCTTGCTCAGGCGATTTCGCTGGACAAATTGAACGAAATCGGCAAGGGCGCGCGCCTTGAAGACGTAATCCTGCCGCTTGAGGCGGGGCTGGACGACATCCCGGCCCTCGATCTCTCTCCGGAGGCGGCAGTGGCGGTCCGACAGGGCCGTGTCCTCACCGGAATGCCCCAAGGTGACGGGTTGTACTGGGCAAGGGCGGGAGAAGTTCCCGTCGCTCTGGTCGAACTCGAAGCCGGGACGGCGAAGGTCGTCAGGGGTTTCAACCTTTAG
PROTEIN sequence
Length: 339
MSVHGWIILDKPVGLGSTQAVGAVKRNMREAGYGKVKVGHGGTLDPLAEGVLPIALGEATKLCGRMLDASKIYDFTIRFGEQTDTLDAEGQVIATSEARPTLAQLEAVLPRFTGQIDQVPPAYSALKVDGKRAYDLARAGEEVELKVRAVTVYALSILPERGRGTMHSMVEGQVPDGASLTGSGPPQVPLHRPSDGPPPRAGENLPEITLTAHVSKGTYIRSLARDIALALGTVGHVTMLRRVKAGPFTLAQAISLDKLNEIGKGARLEDVILPLEAGLDDIPALDLSPEAAVAVRQGRVLTGMPQGDGLYWARAGEVPVALVELEAGTAKVVRGFNL*