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scnpilot_p_inoc_scaffold_1560_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2132..2401)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthetic protein FliQ n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZH2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 121
  • Evalue 3.40e-25
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:GAD50789.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 88.0
  • Bit_score: 121
  • Evalue 4.70e-25
fliQ2; flagellar biosynthetic protein FliQ similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 88.0
  • Bit_score: 109
  • Evalue 6.40e-22

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGGCGCGGATCGGGCGCTGGGCTTCCTGTATGAGGCATTGTGGACCGGGCTGGTTATCTCCGGCCCGGTGCTGATTGCCACTTTGGTGGTGGGCCTGTTGATCTCGATCTTCCAGGTCGCGACGCAAATTCAGGAAATCACGCTCAGCTATGTGCCCAAGACTTTGGTGGCGGGCTTCACGCTGGTTGCGCTGGGCCCGTGGATGCTCGCGCGGCTGACCGATTTTGCCCGTTCGCTCTATCTCGTCATCCCCAGCCTCGGTCATTAG
PROTEIN sequence
Length: 90
MGADRALGFLYEALWTGLVISGPVLIATLVVGLLISIFQVATQIQEITLSYVPKTLVAGFTLVALGPWMLARLTDFARSLYLVIPSLGH*