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scnpilot_p_inoc_scaffold_1414_16

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(19723..20925)

Top 3 Functional Annotations

Value Algorithm Source
Putative ornithine decarboxylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5M7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 401.0
  • Bit_score: 661
  • Evalue 5.30e-187
  • rbh
Putative ornithine decarboxylase {ECO:0000313|EMBL:GAD48426.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 401.0
  • Bit_score: 660
  • Evalue 1.70e-186
decarboxylase similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 408.0
  • Bit_score: 631
  • Evalue 2.20e-178

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
TTGCACATCTATCCCTGCGCATCGGCTGTAGTCCGCGACCTCGCTCCGGACGAACCCGTTATCCTCAATCGCCCGCACGCTGCTGCGCGCGCTGCCCGCTTCTTTGCACAGAAGTTTCCGGGTACGTCGCTCTATGCGGTGAAGGCCAATCCTTCGCCTGAGCTGCTGCAGATCCTGTGGGATTCCGGGATTACCCATTTCGACGTCGCCTCGATTGCCGAGGTGCGGCTAGTGCGTTCGGTGCTGCCTGAAGCCACTTTGTGCTTCATGCATCCGGTGAAAACCGGCAGCGCCATTCGCGAAGCCTATCACGTCCATGGCGTCCGCACCTTCAGCCTCGACACGATCGAGGAACTGGAGAAGATCGTCGCGGCCACCACGGATGCGGCAGGTGAGCCGGCGGGGGATCTTTCGCTGCTGGTGCGTCTGCGCGTTTCGTCCGATTATTCGGAACTGAGCCTTGCGTCCAAGTTCGGCGTGGATCTGGCCGATGCGGCTCCGCTGCTGCAGGCCACTCGCCAGCATTGCGACGCGCTGGGCATCTGCTTCCATGTCGGCAGCCAGGCGATGACGCCCTTTGCCTATGTCCAGGCCCTGGAACGCGTGCGCGCGGCGATTGCCGAGGCGGCCGTGACGGTGGACATCGTGGATGTCGGTGGCGGGTTCCCCAGCCAGTATCCCGGCATGGAACCGCCGCCGCTGGAAGATTTCTTCGCCATTATCGATCGCTATTTCGAAGCTCTTCCCATTTCCTACAATGCGGAGCTTTGGTGCGAGCCGGGCCGCGCTCTGTGTGCGGAATACAGCTCGATGATCGTCAAGGTGGAGAAGCGCCGGGGCGACGAGCTTTACATCAACGACGGTGCCTATGGCGCCCTGTTCGATGCCGCCCATATCGACTGGCGTTTCCCCGTCAGCGCGCTGGGCGAGAAGCTGCATGGCGGCGAAGTGGAATTCGCGTTCTACGGCCCCACTTGCGACGATGCCGATTACATGAAGGGGCCCTTCATGCTCCCGGCCGACATCGGTCCGGGCGATTATATCGAAATCGGCATGCTCGGCGCCTATGGCAGCGCAATGAAGACTGCATTCAATGGCTTCGGCCAGGCAGTGGCAGTCGACGTCGCGGATGAACCGATGGCCAGCCTCTATCGGGGCGACCGGCCAGTTCTCACCAGCGATAACGTCGTCAGCCTGCGCTGA
PROTEIN sequence
Length: 401
LHIYPCASAVVRDLAPDEPVILNRPHAAARAARFFAQKFPGTSLYAVKANPSPELLQILWDSGITHFDVASIAEVRLVRSVLPEATLCFMHPVKTGSAIREAYHVHGVRTFSLDTIEELEKIVAATTDAAGEPAGDLSLLVRLRVSSDYSELSLASKFGVDLADAAPLLQATRQHCDALGICFHVGSQAMTPFAYVQALERVRAAIAEAAVTVDIVDVGGGFPSQYPGMEPPPLEDFFAIIDRYFEALPISYNAELWCEPGRALCAEYSSMIVKVEKRRGDELYINDGAYGALFDAAHIDWRFPVSALGEKLHGGEVEFAFYGPTCDDADYMKGPFMLPADIGPGDYIEIGMLGAYGSAMKTAFNGFGQAVAVDVADEPMASLYRGDRPVLTSDNVVSLR*