ggKbase home page

scnpilot_p_inoc_scaffold_1621_9

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(10191..11612)

Top 3 Functional Annotations

Value Algorithm Source
Putative GntR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKZ0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 473.0
  • Bit_score: 591
  • Evalue 1.00e-165
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 473.0
  • Bit_score: 591
  • Evalue 2.90e-166
  • rbh
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:BAK67542.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 473.0
  • Bit_score: 591
  • Evalue 1.50e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGAACGCCGCCGAACGCATCTACACCGCCTCCACGCGCGAGGGGGAGACGGCCGCCCGAATGGCCGAGATTCTGGCCCGCCGCATTGAAGACGATATAGCCTCCCTCAGGCCGCCGCCGGGCGACGCACTGGGCAGCCTGCGCGATCTTGCCAAGCGTTATAGCGTGGGCCGGGCCGTCATCCGCGAGGCTATCGGCCTGCTGGAACGGCGCGGCCTTGGCAGCCTGAGACCCGGCCCGAGCGGCGGCTTCATCGTGAAGATGCCGCAGGTGGACGCCATCGGGGAAGAACTGGCCGACCATTTCCGCGCGGTGGGGCTCACCCTGTCGCAATTGCTCGACGCGCGCGAAGCGGTGGATCTGATGATCGTGCGGCTGGCGGCACAGGCCCGGCCCAGCTCCATGGCGCTGGGGCGGCTGGAACTGGCGACCGATGCGGATGATATTCACGGCCACCTCGCCCTGCGCAGCGAGCTGGCGCGGCTGACGCGCGAACCCGCCGTGATGCCCTTCGTCAAATGCCTGAACGCGCTGACGATGGATTTCGCCGCCGGCAATCCCGAAGCCAGCGATTATCCCGCCAGCGTTCCACTCGCCACGGCCGATCTGCGCCGCGCACTGGCGCAGGGCGATGGTGAAGGCGCGGCGGCGGCATTCGGGGGATTGCATGGCGATCTGTTCCGGCTGCTGCGCCCGCGTGAGAGCGTGGCCGAGCCCCAAGTGGAAGAAACCGCCCGGACGAGTGACGAGCGCACTCTGGCGGCGCTGGTGGCACGCCGCCTTGCCAGCGACATCCTGCAGAACGGCAGTGCCGGCCAACGGCTCGGTTCCGAATGGGATCTGTGCGAGCGCTTCAGCGTCAGCCGGCTTACCCTGCGTCAGGCGATCCGGCTGCTGCAGGATAGCGGGTTGGTTGAATGCCGGCGGGGGCGCGGCAACGGGCTGGTTGTCCGCAACAGCCGCATGACCGGCACGATCCGCCTGTTGCTGGCCTATCTCATCGGGCAGCAGATGGATGTCCGCTCTGCCGGGACGATCCTGTTCCAGCTCAATTGCTTCATGCCCGCGCTGGCCGTCAGCCGCGCCGATGCGGAACAGAGGGCCAAGCTGGAAGAGCTGCTGCTGCGGGTTGAACAAGGCGACGTGCTGGAACGCTTTGACCTGCTCAATTTCGTCCACTTCGTATCGCGCGTGGCGGACAATCCGGTGATCGATCTGTTCTCACGCTGCCTCGCCGCCTATGAAGCGCGCTTCCACCCCTTCCTGGCCGAGCGCCTGCCGGTGACATTACAGGCCAGCTATTTCCGCCTGATGCGCCAGTTGCTCGATCAGGCAGGATCGGGCGCGGGGATGGACCTTGCCCGCATGAAGGAAGAGGCTGCGCGGGTCATGCTGGAAATGAGCCGCAGCCGGCCGATTTAA
PROTEIN sequence
Length: 474
MNAAERIYTASTREGETAARMAEILARRIEDDIASLRPPPGDALGSLRDLAKRYSVGRAVIREAIGLLERRGLGSLRPGPSGGFIVKMPQVDAIGEELADHFRAVGLTLSQLLDAREAVDLMIVRLAAQARPSSMALGRLELATDADDIHGHLALRSELARLTREPAVMPFVKCLNALTMDFAAGNPEASDYPASVPLATADLRRALAQGDGEGAAAAFGGLHGDLFRLLRPRESVAEPQVEETARTSDERTLAALVARRLASDILQNGSAGQRLGSEWDLCERFSVSRLTLRQAIRLLQDSGLVECRRGRGNGLVVRNSRMTGTIRLLLAYLIGQQMDVRSAGTILFQLNCFMPALAVSRADAEQRAKLEELLLRVEQGDVLERFDLLNFVHFVSRVADNPVIDLFSRCLAAYEARFHPFLAERLPVTLQASYFRLMRQLLDQAGSGAGMDLARMKEEAARVMLEMSRSRPI*