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scnpilot_p_inoc_scaffold_2173_11

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 9589..10008

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:BAK65926.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK65926.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 3.30e-65
Protocatechuate 4,5-dioxygenase alpha chain n=4 Tax=Sphingomonadaceae RepID=PCYA_SPHPI similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 2.30e-65
ligA; protocatechuate 4,5-dioxygenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 6.60e-66

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGAGCGAAAAGAAGCAGAGGATCGACATCCACGAATACCTCGCGGCGTTCGACGACATCCCGGGCACCCGGGTGTTCACCGCGCAGCGCGCCCGCAAGGGCTATTGGCTGAACCAGTTCGCGATGAGCCTGATGAAGGAAGAAAACCGCGAGCGCTTCAAGGCCGATGAAAGCGCCTATCTCGACGAGTGGAATCTGACGCCCGCCGCCAAGCAGGCCGTGCTGGACCGCAATTACAACGCGATGATCGATGAAGGCGGCAACGTCTACTTCCTGTCCAAGCTGTTCTCCACCGATGGCAAGAGCTTCCAGTTCGCCGCCGGTTCGATGACGGGCATGACCCAGGAAGAATATGCACAGATGATGATCAACGGTGGCCGTTCGCCCGAAGGCGTGCGCTCGATCAAGGGAGGTTTCTGA
PROTEIN sequence
Length: 140
MSEKKQRIDIHEYLAAFDDIPGTRVFTAQRARKGYWLNQFAMSLMKEENRERFKADESAYLDEWNLTPAAKQAVLDRNYNAMIDEGGNVYFLSKLFSTDGKSFQFAAGSMTGMTQEEYAQMMINGGRSPEGVRSIKGGF*