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scnpilot_p_inoc_scaffold_1641_12

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 12179..12712

Top 3 Functional Annotations

Value Algorithm Source
Putative CarD family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2G7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 177.0
  • Bit_score: 328
  • Evalue 3.60e-87
  • rbh
Putative CarD family transcriptional regulator {ECO:0000313|EMBL:GAD48948.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 177.0
  • Bit_score: 328
  • Evalue 5.10e-87
carD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 177.0
  • Bit_score: 327
  • Evalue 1.70e-87

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGTAGCCAAGGCTCCCGCCTTTTCCGTCGGCGATTATGTTGTCTATCCCAAGCACGGCGTTGGCCGTGTGATCGAGCTGCAGAACGAAGAAATCGCCGGCATGCAGCTCGAACTTTATGTGCTCCGCTTCGAGAAGGAACGCATGACGCTGCGCGTTCCGGTCAACAAGGTCGAAGCAATTGGTATGCGCAAGCTTTCCAGCGACAAGACGCTGCGCGAAGCGCTCGACACACTCAAGGGCAAGCCCAAGGTAAAGCGTACCATGTGGTCGCGCCGTGCCCAGGAATATGAAGCGAAGATCAATTCAGGCGATCTCGTTTCGATCGCCGAAGTGACTCGCGACCTGTTCCGCGCCGATGACCAGCCGGAACAGAGCTATTCCGAGCGTCAGATTTTCGAAGCAGCCTCCAGCCGTCTCGCACGGGAACTGGCAGCGATGGAAAAGACCGACGAACCGGCCGCTCTTCAAAAGATCCTCGCGATCCTCAACGAGCATGCGCCGAAATATTACGAAACCGCTGAAACCGCCTGA
PROTEIN sequence
Length: 178
MVAKAPAFSVGDYVVYPKHGVGRVIELQNEEIAGMQLELYVLRFEKERMTLRVPVNKVEAIGMRKLSSDKTLREALDTLKGKPKVKRTMWSRRAQEYEAKINSGDLVSIAEVTRDLFRADDQPEQSYSERQIFEAASSRLARELAAMEKTDEPAALQKILAILNEHAPKYYETAETA*