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scnpilot_p_inoc_scaffold_1808_8

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(11634..12551)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7T4_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 290.0
  • Bit_score: 230
  • Evalue 1.80e-57
Transcriptional regulator of araC family {ECO:0000313|EMBL:GAO53401.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 294.0
  • Bit_score: 243
  • Evalue 2.80e-61
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 290.0
  • Bit_score: 230
  • Evalue 5.00e-58

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGAAAAGCGTGCCGATCTCGCCCGATATGGCCTCTATGGCGAGAATGAGCGGCTGATCGTCCCGGAATTCCTGCATATCGAGCAGATATCCGCCCGCGCGAGCCTCTACGAATGGGACATTTCCGCGCATAGCCATTCCACTCTCCACCAGATCATCCTGCTGGATGAAGGATCGGCCGTCCTCCATGCGGATGAGCGGGAAGTGGGGCTTGGGCCGAATATGCTGATCGCCATCCCCAGCCATTGCATCCACGCCTTGCACTTTTCGCCCAAAGCAGAAGGCTGGGTTCTGTCCGCCGCCACTGACCTGCTTCACCATCCCCGGCTGGCGCGGGCGGGCGATATGGCTGCGTTCCGGCGGGCCCATGCCGGTGTCGCCCAGCTTGATCCGGAAGGGCGGGAGATCGCGCGGCTGCGGTGGACCATGGCCCAGATCGCCGCCGATCTGGAGCTTGCCGGGCCGGCCCAATTGTCCAACCACCTGCTCGCGGAATTCGGCCTGCTGCTCACCCTGGCGGATGACTTGCTGGAGCAGGAAGAAGCAGGCTCCGCCCTGTCGCGGCAGGGCGCGCTGGCCCGGGAATTCCGGGCGCTGGTGGATCGCGAATTTGCCGGAAACTGGCCCATTGCGCGCTATGCGCGGGAGCTGGGCACGACTGAGCCGACCCTGACTCGCGCCTGCCGCGCGGCCTTCGGCAAGGCGCCGGGCGAAGTGATCCATGCGCGCCTGCTGCTGGAGGCGATGCGCTACCTCACCTATTCCAGTGCCAGCATCAGCCAGATTTCCGGCAGACTGGGCTTTGCCGACCCGGCCTATTTCGCGCGCTTCTTCAAGGGCAAGACCGGCCGGACTGCGAGCGAGTTCCGCCAAGAACGCGCCTGGGTCTCGGCTGCGCCCCACCGCAAGGCCGGGTGA
PROTEIN sequence
Length: 306
MEKRADLARYGLYGENERLIVPEFLHIEQISARASLYEWDISAHSHSTLHQIILLDEGSAVLHADEREVGLGPNMLIAIPSHCIHALHFSPKAEGWVLSAATDLLHHPRLARAGDMAAFRRAHAGVAQLDPEGREIARLRWTMAQIAADLELAGPAQLSNHLLAEFGLLLTLADDLLEQEEAGSALSRQGALAREFRALVDREFAGNWPIARYARELGTTEPTLTRACRAAFGKAPGEVIHARLLLEAMRYLTYSSASISQISGRLGFADPAYFARFFKGKTGRTASEFRQERAWVSAAPHRKAG*