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scnpilot_p_inoc_scaffold_2595_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..1866)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose- similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 622.0
  • Bit_score: 1087
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 622.0
  • Bit_score: 1077
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B70E4B similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 622.0
  • Bit_score: 1104
  • Evalue 0.0
  • rbh

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1866
ATGTCGAATCCTCCCGCCACACCGCTGCTCGATACGGTCGATATCCCTGCCGATCTCCGCAAGTTGAAGCCGGGGCAATTGCGCCAGTTGGCGGATGAATTGCGGCAGGAGATGATCTCGGCTGTCGGTTCCACCGGCGGGCATCTCGGCTCTGGCCTTGGCGTGGTCGAGCTGACCGTGGCGATCCATTATGTGTTCAACACGCCGGATGACCGGCTGATCTGGGATGTGGGCCACCAGGCCTATCCGCACAAGATCATCACCGGCCGGCGGGAGCGTATCCGCACCCTGCGTCAGGGCGGCGGGCTTTCCGGCTTCACCAAGCGCAGCGAAAGCGAATACGATCCTTTCGGCGCGGCCCATTCCTCCACCTCGATTTCGGCGGGCCTTGGCTTTGCCATAGCCAACAAGCTGGCGGACACGCCGGGCAAGGCCATCGCGGTGATCGGGGACGGCGCGATGAGCGCGGGCATGGCCTATGAGGCGATGAACAACGCAGAAGCCGCCGGCAACCGGCTGGTGGTGATCCTCAACGATAACGACATGTCCATCGCGCCGCCGGTCGGCGGGCTTTCGGGCTATCTCGCGCGGCTGGTTTCCAGCGCGCAGTTCCTCGGCCTGCGCGATCTGGCCAAGAAATTCGCCCGCCGCCTGCCCGCCCCGCTGCACCGCGCTGCCAAGAAGACGGATGAATTCGCGCGCGGCATGGCCATGGGCGGCACCCTGTTCGAAGAACTGGGCTTCTATTATGTCGGCCCGATTGACGGGCACGATCTGGACCAGCTGGTGCCGGTGCTGGAAAATGTGCGCGATGCGGCGGAAGGGCCCTGTCTCGTCCATGTCGTGACGCAGAAGGGCAAGGGCTATGCCCCGGCCGAACAGAGCGCTGACAAGTATCACGGCGTCCAGAAGTTCGACGTCATCACTGGTGAACAGAAGAAAAGCGCGGGCGGACCGCCCAGCTACACTGGCGTATTCGCCAAGGCGCTAATGGCGGAAGCTGCACAGGACGACCGCATTTGCGCGATCACGGCGGCGATGCCTTCGGGCACCGGGCTGGACAAATTCGCCGCAGCCTATCCCGACCGCACTTTCGATGTCGGCATTGCCGAACAGCACGCCGTCACCTTCGCTGCGGGACTAGCCGCCCAGGGTATGAAGCCTTTCTGCGCGATCTATTCCACCTTCTTGCAGCGCGCCTATGATCAGGTGGTGCATGATGTGGCGATCCAGAACCTGCCGGTGCGCTTTGCCATTGACCGTGCCGGGCTGGTCGGGGCCGATGGCGCGACACATGCGGGCAGCTTCGATGTGACCTATCTCGCCAGCTTGCCCAATTTCGTGGTTATGGCCGCTGCGGATGAGGCGGAGCTGATGCATATGACGCATACGGCCGCCTGTTATGACGATGGCCCCATCGCCTTCCGCTATCCGCGTGGCAATGGCGTGGGCGTACCTTTGCCCGAAGTTCCGCAGATGCTGGAAATCGGCAAGGGCCGCGTTGTGCGTGAAGGGACCAAGATCGCCCTGCTTTCGCTCGGCACGCGCCTTGCCGAAGCGCTCAAGGCGGCCGACCAGCTGGAGGCCAAGGGCCTGTCCACCACCGTGGCGGACCTACGCTTCGCCAAGCCGCTGGACAGCGAATTGATCCGCCGTCTGATCGCCACGCATGAAGTGGTGGTCACGATTGAGGAAGGCTCCATCGGTGGCCTTGGCGCCCATGTGCTGACCATGGCCAGCGACGAAGGGCTGACCGATAGCGGCCTGAAGATTCGCACCTTGCGCCTGCCGGACATCTTCCAGGATCAGGATTCGCCGGAAAAGCAATATGACGAAGCCGGCCTCAATGCGGGTGGTATCGTCGAT
PROTEIN sequence
Length: 622
MSNPPATPLLDTVDIPADLRKLKPGQLRQLADELRQEMISAVGSTGGHLGSGLGVVELTVAIHYVFNTPDDRLIWDVGHQAYPHKIITGRRERIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGLGFAIANKLADTPGKAIAVIGDGAMSAGMAYEAMNNAEAAGNRLVVILNDNDMSIAPPVGGLSGYLARLVSSAQFLGLRDLAKKFARRLPAPLHRAAKKTDEFARGMAMGGTLFEELGFYYVGPIDGHDLDQLVPVLENVRDAAEGPCLVHVVTQKGKGYAPAEQSADKYHGVQKFDVITGEQKKSAGGPPSYTGVFAKALMAEAAQDDRICAITAAMPSGTGLDKFAAAYPDRTFDVGIAEQHAVTFAAGLAAQGMKPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLASLPNFVVMAAADEAELMHMTHTAACYDDGPIAFRYPRGNGVGVPLPEVPQMLEIGKGRVVREGTKIALLSLGTRLAEALKAADQLEAKGLSTTVADLRFAKPLDSELIRRLIATHEVVVTIEEGSIGGLGAHVLTMASDEGLTDSGLKIRTLRLPDIFQDQDSPEKQYDEAGLNAGGIVD