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scnpilot_p_inoc_scaffold_2700_10

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(9889..10362)

Top 3 Functional Annotations

Value Algorithm Source
SmpA/OmlA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEM9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 159.0
  • Bit_score: 198
  • Evalue 3.80e-48
Outer membrane protein assembly factor BamE {ECO:0000313|EMBL:AKH43980.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 157.0
  • Bit_score: 201
  • Evalue 1.10e-48
membrane protein SmpA similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 159.0
  • Bit_score: 198
  • Evalue 1.10e-48

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGATGCCCAAGGTTCGGATCGCTGCGATTGTGACGCTCGCGGCCTTGTTGGCCGGCTGCAGCTCCATCGCGGATCATCGCGGCTACATCGCCGACGAGGCGCTGGTGCAGGCCGTGCAGCCGGGCATCGATAATCGGGAATCGGTTGAAGGCACTCTTGGCCGTCCGACCTTTGCCAGCGAATTCGGTAATCCGATCTGGTATTATGTTTCCAGCACAACCTACCAGAAGCCGTTCCGCAAGCCGCGTATCGGGCAGCATTCGGTGCTGGCCGTGACCTTTGACGAGAAGGGCAACGTGGTCTCCGCAGAGCGCTGGGGCATGGACAAGGTCGCCAAGATCAGCCCCGAAGGGGACAAGACGCCCGTGCTTGGCAAGGAGCGTGGCTTCCTTGAAGATCTGTTCGGCAATATCGGCCAGGTCGGCGCTATGGGTTCCAATGCTCCCAGTGGTCCAGGTCCGAACGGCAGCTGA
PROTEIN sequence
Length: 158
MMPKVRIAAIVTLAALLAGCSSIADHRGYIADEALVQAVQPGIDNRESVEGTLGRPTFASEFGNPIWYYVSSTTYQKPFRKPRIGQHSVLAVTFDEKGNVVSAERWGMDKVAKISPEGDKTPVLGKERGFLEDLFGNIGQVGAMGSNAPSGPGPNGS*