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scnpilot_p_inoc_scaffold_2028_9

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(4051..5106)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:AKH41170.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKH41170.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadal similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 351.0
  • Bit_score: 657
  • Evalue 1.20e-185
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 351.0
  • Bit_score: 636
  • Evalue 3.50e-180
DNA-directed RNA polymerase subunit alpha n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZS67_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 351.0
  • Bit_score: 650
  • Evalue 1.10e-183
  • rbh

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGTCCGTCAACATGAAGAACTGGCAGGAACTCAAGAAGCCCAACAGCCTCGAAGTGAAGGCCGGTGGCGACGGGCGCCGCAAGGCGACCTTCATTGCCGAACCGCTCGAGCGCGGTTTTGGCCTGACGCTGGGCAACGCCCTGCGCCGCGTGCTGCTTTCCTCGCTGCAGGGCGCTGCGATCACCTCGATCAAGATCGAGAACGTGCTGCATGAATTCTCGTCGCTCGCCGGCGTGCGCGAGGATGTGACCGACATCGTCCTGAACGTGAAGCAGATCGCGCTCAAGATGGAAGGCGAAGGCCCCAAGCGGCTGCAGCTTTCGGCGACCGGCCCGGCCCAGGTAAAGGCGGGCGACATTGCCGTTACCGGCGATATCGAGGTGATGAACAAGGATCTCGTGATCTGCCATCTCGATGAAGGCGCCACACTGAACATGGAACTTACGGCGGATACCGGCAAGGGCTATGTCCCGGCCGTGTCCAACCGCCCTGTCGACGCGCCGATCGGCCTGATCCCGGTGGACTCGCTCTACTCGCCGATCAAGCAGGTCAGCTACAAGGTCGAGAACGCTCGCGTTGGCCAGGAACTGGACTACGACAAGCTGAGCCTGAACGTCGAAACCGACGGTACGGTGACCCCTGAAGACGCCGTGGCCTATGCCGCGCGCATCCTGCAGGACCAGTTGACCCTGTTCGTCCACTTCGAAGACGGTATTCCGCAGCCTTCCAGCCCGATGATCGGCATTGCCGCTCAGCCGGAAGAATCGGACGCCAACCAGCTCAACCGTTACCTCCTCAAGAAGGTGGACGAGCTGGAGCTTTCGGTGCGTTCGGCCAATTGCCTCAAGAACGACAACATCATCTATATCGGCGATCTGGTCCAGAAGACCGAAGCCGAGATGCTGCGCACGCCGAATTTCGGCCGCAAGTCGCTCAACGAGATCAAGGAAGTCCTCAGCTCCATGGGCCTGCGCCTGGGCATGGATATCCCTGGCTGGCCGCCCGAGAACATCGAGGAAATGGCCAAGAAGCTCGAGCAGGAACTGCTGGGCTGA
PROTEIN sequence
Length: 352
MSVNMKNWQELKKPNSLEVKAGGDGRRKATFIAEPLERGFGLTLGNALRRVLLSSLQGAAITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPAQVKAGDIAVTGDIEVMNKDLVICHLDEGATLNMELTADTGKGYVPAVSNRPVDAPIGLIPVDSLYSPIKQVSYKVENARVGQELDYDKLSLNVETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIPQPSSPMIGIAAQPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG*