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scnpilot_p_inoc_scaffold_2028_11

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(5657..6025)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPN4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 122.0
  • Bit_score: 232
  • Evalue 2.40e-58
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 122.0
  • Bit_score: 230
  • Evalue 2.00e-58
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 122.0
  • Bit_score: 230
  • Evalue 9.90e-58

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCTCGTATTGCCGGGGTAAACATCCCCACCAACAAGCGCGTGATCGTCGCGCTCACCTATATTCACGGTATCGGCCCCAAGTCGGCCATCGAAATTGCGGACAAGCTGGGCATCGACCACAGCCGCCGCGTCCAGGATCTTTCCGATGCGGAAGTCCTGCAGATCCGTGAAGCGATCGACGCCGGTTACACCGTTGAAGGTGACCTTCGTCGTAACACCGCGATGAACATCAAGCGCCTGATGGACCTGGCCTGCTATCGCGGCCTCCGCCATCGCAAGGGCCTGCCCGTCCGTGGCCAGCGCACGCATACCAATGCGCGCACCCGCAAGGGCAAGGCCAAGCCGATCGCAGGTAAGAAGAAGTAA
PROTEIN sequence
Length: 123
VARIAGVNIPTNKRVIVALTYIHGIGPKSAIEIADKLGIDHSRRVQDLSDAEVLQIREAIDAGYTVEGDLRRNTAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGKKK*