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scnpilot_p_inoc_scaffold_2028_16

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(10453..10629)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD093A similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 57.0
  • Bit_score: 111
  • Evalue 2.30e-22
50S ribosomal protein L30 {ECO:0000313|EMBL:AKH41163.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 57.0
  • Bit_score: 113
  • Evalue 1.10e-22
rpmD; 50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 57.0
  • Bit_score: 108
  • Evalue 5.40e-22

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 177
ATGGCAAAGATCAAGATCAAGCAGATCGGTTCGCCGATCCGCCGGCCCGAAAGCCAGAAGAAGATCCTCATCGGTCTGGGCCTGGGCAAGATGCACCGCGTGGTCGAGGTGGAAGACACCCCGGAAGTGCGCGGCGCCATCGCCAAGCTGCCGCATATGGTGGAAGTGGTCGGCTGA
PROTEIN sequence
Length: 59
MAKIKIKQIGSPIRRPESQKKILIGLGLGKMHRVVEVEDTPEVRGAIAKLPHMVEVVG*