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scnpilot_p_inoc_scaffold_2028_19

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(11722..12255)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0C7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 309
  • Evalue 2.30e-81
  • rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 309
  • Evalue 3.20e-81
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 177.0
  • Bit_score: 297
  • Evalue 2.50e-78

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCCGCATCGGTAAAGTGCCGGTGACGATCCCCAGTGGCGTCACCGCCGACATCAAGGACGGTATCCTGACCGTGAAGGGCCCGAAGGGCACGCTCACGCTGGGTCTGGCCGACGATGTGACCTACGAGGTTCAGGACGGCACCATCTCGGTGCGTCCGGCCAATGACAGCAAGCGCGCCCGTTCCTTCTGGGGCATGCAGCGCACGCTGGTCGCCAATCTCGTTTCGGGCGTGACCGAAGGCTACACCAAGGTGCTTGAAATCACCGGTGTCGGCTATCGTGCGCAGGCCCAGGGCGCGAAGCTCAAGCTCCAGCTCGGCTACAGCCATGACGTCGATCTCGACGTGCCGGAAGGCCTGGAAGTGAAAACCCCTGATCAGACCACGGTCGAGATCAACGGGATCGACAAGCAGAAGGTCGGCCAGTTCGCGGCCGAAGTTCGCCGGTGGCGCAAGCCTGAGCCCTATAAGGGCAAGGGTATCAAGTACCGCGGCGAATACATCTTCCGCAAGGAAGGGAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKVPVTIPSGVTADIKDGILTVKGPKGTLTLGLADDVTYEVQDGTISVRPANDSKRARSFWGMQRTLVANLVSGVTEGYTKVLEITGVGYRAQAQGAKLKLQLGYSHDVDLDVPEGLEVKTPDQTTVEINGIDKQKVGQFAAEVRRWRKPEPYKGKGIKYRGEYIFRKEGKKK*