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scnpilot_p_inoc_scaffold_2028_23

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(13567..13887)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ72_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 181
  • Evalue 5.60e-43
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 181
  • Evalue 7.80e-43
rplX; 50S ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 106.0
  • Bit_score: 171
  • Evalue 9.50e-41

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGTCTGCCGCCAAGATCAAGAAGGGCGACACCGTCGTCATCCGTTCGGGCAAGGACAAGGGCCGTACCGGCACTGTGACCAAGGTCCTGCCGCAGGACGGCAAGGTCGTGGTTCAGGGCGTCAACGTTGCCGCCCGTCACCGCAAGCCGTCGCAGACGAACCCGCAGGGCGGGATTGATCGTTTCGAAGCGCCGCTCGCCATTTCGAAGGTTTCGCTCGCTGACCCCAAGTCGGGCCAGGCAACGCGCGTCCGTTTCGAAGTGCGTGATGGCAAGAAGGTCCGTGTGGCCGTGAAGTCCGGGGAGGTCATCAGTGGCTGA
PROTEIN sequence
Length: 107
MSAAKIKKGDTVVIRSGKDKGRTGTVTKVLPQDGKVVVQGVNVAARHRKPSQTNPQGGIDRFEAPLAISKVSLADPKSGQATRVRFEVRDGKKVRVAVKSGEVISG*