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scnpilot_p_inoc_scaffold_2369_14

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 12378..13013

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase HrpB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8M4_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 212.0
  • Bit_score: 333
  • Evalue 1.80e-88
ATP-dependent helicase hrpB {ECO:0000313|EMBL:GAO55528.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 212.0
  • Bit_score: 340
  • Evalue 2.00e-90
ATP-dependent helicase HrpB similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 212.0
  • Bit_score: 331
  • Evalue 1.40e-88

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGACCGATCTTCCCATCCATGCCGTCCTGCCCGAGCTTCTCGGCGCCCTGCGCGAGCGTAATTCCGCCGTGCTGATCGCCCCGCCGGGCGCGGGCAAGACCACGTCAGTGGCACCCGCTTTGCTGGGTGAGGATTGGTGTAACGGCAAGGTCATCCTCCTTTCCCCCCGCCGTGTGGCTGCGCGCGCTGCTGCCGAACGTATGGCGGAACTGCTGGGCGAGAAGCCCGGCGAGACGGTGGGCTATCTCACTCGCCTTGATAGCAAGATGTCCGGCAAGACGCGGATCGTGGTGATGACGGAGGCGATCTTCGTTGCGCAAATCCTCGACGACCCAGAGCTGGCGGGCGTTTCCGCCGTGTTGTTCGATGAAGCGCATGAGCGGCATCTGGATAGCGATCTCGGCCTCGCCCTCGCGGTGGAAAGCCAGCAGGTTCTGCGCGAGGATCTGCGCCTGATCGTCATGTCCGCCACGATCGACGGCACGCGTTTCGCAGGTTTGCTGGGCGATGCGCCGGTGGTGGAGAGTGAGGGCAAAGCCCATCCCCTGCACTTCGTCTGGTTGGGCAGCCGCCCGGAACTGCGCGTCGAGGATGGGATGACCTCCGCCATCCTTGCCGCATGGCGTGAGGAACAG
PROTEIN sequence
Length: 212
VTDLPIHAVLPELLGALRERNSAVLIAPPGAGKTTSVAPALLGEDWCNGKVILLSPRRVAARAAAERMAELLGEKPGETVGYLTRLDSKMSGKTRIVVMTEAIFVAQILDDPELAGVSAVLFDEAHERHLDSDLGLALAVESQQVLREDLRLIVMSATIDGTRFAGLLGDAPVVESEGKAHPLHFVWLGSRPELRVEDGMTSAILAAWREEQ