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scnpilot_p_inoc_scaffold_2342_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(4619..5836)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein-releasing system transmembrane protein LolC n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRL9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 404.0
  • Bit_score: 647
  • Evalue 1.00e-182
  • rbh
Lipoprotein-releasing system transmembrane protein LolC {ECO:0000313|EMBL:GAD48014.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 404.0
  • Bit_score: 647
  • Evalue 1.50e-182
lipoprotein-releasing system permease similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 404.0
  • Bit_score: 633
  • Evalue 3.40e-179

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGATCGCCAAGCGCTACATGCTGCCCGGCAGGGGGGAGGCCTTTATCGCCCTCGTCGCCGGTATCAGCCTTGTGGCGGTGATGCTTGGCGTTGCCGCGCTTGTCATCGTGATGAGCGTGATGAACGGCTTCCGTGCCGAACTGCTCGACAAGATCGTAGGGCTGAACGGCCATGCGATTATCCAGGCCTATGGCGAGCGGTTCGATAATTGGCAGGATGTGCTCAAGGAAGTGAAGAAGACGCCGGGCGTGGTCCGCGCTTCTCCCCTGATTGAAAAGCCGCTGCTGGTTACGTTCAATGGCCGCGTTGAAGGCGTGCTGGTGCGCGGCAATACGCAGGAAGACATCAATCGCCTCAAGCCGCAGCAGGTTTCCGGCAGCCTTGCCCAATTGCGGCCGGGCGCCAGCAAGGTTGCCATCGGCAGCAGGCTGGCGGAAAATCTCGGCGCGCGGATCGGCGATACGATCACCATCATCAATCCCGCCGGCCGGGCGACGCCTTTCGGCACCGTGCCGCGCCAGATCGGCTATGAAGTGGCCGCGATCTTCGAAGTGGGTGTGTATGATTATGACGAGAAATTCGTCGTCATGCCTATGCAGGATGCGCAAACCCTGCTGCTGATCGGCGATACGGTGGGCATGATCGAGGTGAAGACGATCAACCCCGACAAGGTGACAGAAATCCTCGCTCCGGTTCAGCGCCAGCTCGCGGGCGTGGCCGTTATTTCCGACTGGAAGACGATTAACTCCAGCCTGTTCGAGGCTCTGGCGGTGGAGCGGGTGGCGATGTTCGTCGTCCTGTCCATCATCGTGCTGGTGGCGGTGTTCAACATCCTGTCGTCGCTCATCATGCTGGTGCGTGCCAAGACACGGGACATCGCGATCCTGCGCACCATGGGCGCCACGCGGACGAGCATGCTCAAGATATTCGTCACCACCGGCTTCCTGATCGGCGCGCTGGGCACCGCGGCGGGGCTGGCGCTGGGCTTCGTGTTCCTGTTCTTCCGCCAGCAGATTGTGCGCGGGATAGAGATCGTGACGGGGCAGAACCTTTGGGACCCTTCGATCCGCTTCCTCACCGAATTGCCGAGCCGCACCGATCCGGGCGAAGTCATCGCCATCAGCATAATGGCGCTGGTGTTCAGCTTCGTGGCTACGCTTTATCCGGCGTTTCGCGCCGCCAATACCGATCCTGTGCAGGTGCTGCGCTATGAATAA
PROTEIN sequence
Length: 406
MIAKRYMLPGRGEAFIALVAGISLVAVMLGVAALVIVMSVMNGFRAELLDKIVGLNGHAIIQAYGERFDNWQDVLKEVKKTPGVVRASPLIEKPLLVTFNGRVEGVLVRGNTQEDINRLKPQQVSGSLAQLRPGASKVAIGSRLAENLGARIGDTITIINPAGRATPFGTVPRQIGYEVAAIFEVGVYDYDEKFVVMPMQDAQTLLLIGDTVGMIEVKTINPDKVTEILAPVQRQLAGVAVISDWKTINSSLFEALAVERVAMFVVLSIIVLVAVFNILSSLIMLVRAKTRDIAILRTMGATRTSMLKIFVTTGFLIGALGTAAGLALGFVFLFFRQQIVRGIEIVTGQNLWDPSIRFLTELPSRTDPGEVIAISIMALVFSFVATLYPAFRAANTDPVQVLRYE*