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scnpilot_p_inoc_scaffold_2342_9

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 9415..12915

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000313|EMBL:AKH41747.1}; EC=3.6.4.- {ECO:0000313|EMBL:AKH41747.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; E similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 999.99
  • Bit_score: 1872
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZPR0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 999.99
  • Bit_score: 1864
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 999.99
  • Bit_score: 1832
  • Evalue 0.0

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
GTGTTTGCAGCGAAGAACCCTATGCCTGATTTCCAACGCATTCTTTCCGCCCGCTCTCCCCTGACGCTCGCCTCGGTGGCGCGCGGGGCACAGCCGCTTGTGCTGGCGGATCTGGCGCGCGCATCGAAGGGCCGGGCCGTGTTCGTCGCCCCGGACGATACGGCAATGCGTGCTGTGGCCGATGCCGCAGCCTTCTTCGCACCAGAGCTGGAAGTGATCGAATTCCCGGCTTGGGACTGCCTGCCATACGACCGTGCCAGCCCGGCCCTTTCCATCAGTTCCCAACGCCTTGCCGCGCTTCATAAATTGCAGCGCGGCAAGAAGAACGGGCAATTGCTGGTCACCACCGTCAACGCCCTGCTCCAGCGCGTCTTGACGCCTTTCCGCATCCGCGAATCCGTGCGCGAGATCGTGCCCGGAATGCAGATCGGGCATGAAAGCCTGATCGCACTGCTCCAGCGGCAGGGCTATTCGCGCACCGACACCGTGATCGACGCGGGCGAATTCGCGGTGCGCGGTTCGGTCTTCGATATCTTCCCCTCGGGCTTCGAGGGCGGGCTCAGGCTGGACTTCTTCGGGGACGAGCTGGAAAGCCTCCGCCTGTTCGATCCTTCCACCCAGCGCAGCACCGGCATTGTGGAAGGGCACCTGCTGCTGCCCGCCAGCGAGGCCCTGCTGGATGAGGATACCGTCAAGCGCTTCCGCACCCGTTACCGCGAGATGTTCGGCGCCAATGCCACGGGCGATCCGCTCTATCAGGCCGTCAGCGACGGGCGGCGCCTTGCCGGCATGGAACATTGGCTGCCGCTGTTCGAGGACAAGCTCACCACTTTGTTCGATCATCTGTCGGACGATGACGTGATCCTGATCGACAATGCCGCGATGGGCTCGGCGGATGAGCGGCTGGGCGATATCGAGGATTATCATCAGGCTCGTGTTGAGGCATCGGGGCAAGCGGCAGGCTCCTATCGCCCGCTGGCCAGCAACGCGCTTTATCTTTCACGGGACGAATTCACGGAGCATCTGTCGGGCTGGCCGGTCCACAAGGCGGATATTTTCGCCCAGCCTGAAAGCGCGAGCGTAATCGACTTCGCCTTTTCCAGTGCGCGAGACTTCGCGCCGGAACGCGCCCGGGGCGACAATGTGTATGAAGCCGCCGCCCGCCACCTCAACAGCATCGGCAAGGCCGGGCGCAAGCCGCTGATCGCAGCCTATTCCCAAGGTTCACGCGCGCGCATTTCATCCATCCTTGCCGAGCAGGGGGCGGAGCCTCGCCTGGCCGACACTTGGCAGGAGGCATTGGGCCTTGCCGCCAAGGGTGCGCCGGTTGCGGTCGTCCTGCCGCTGGAAACCGGTTTCGCCAATGCCGAGATGGAAGTCGTTACCGAGCAGGACATGCTGGGTGACAGGCTGGTCCGCCGCCGCAAGCGCCGCAAGGACGCCGACGCATTCCTGGCCGAACTCTCCGCCCTCAACGCCGGCGATCTGGTCGTCCATATCGATCACGGTATCGGCAAATATCTCGGCCTTGAGGCCATCGCGGTCGGCAAGAGCCAGCATGATTGCGTGATGCTGGAATATGCGGGCGGGGATAAGCTCTACATCCCGGTCGAGAATATCGACGTCCTCACTCGCTACGGTTCCTCGGACGAGGCGCTGCCGCTCGACCGGCTGGGCGGCGAGGCATGGCAGAAGCGCCGTGCAAAGCTGAGGGAGCGCATTCAGGCCATCGCCGCCGAACTGCTGCGCACCGCTGCCCTGCGCGCCCTGCGCACTGCCCCGGCGCTGGTGCCCGATGAAAGCGGCTATAACCAGTTCGTCGAGCGGTTCCCCTGGCAGGAAACCGAGGATCAGGAACGCGCGATCGAGGACGTGCTGCACGATCTGGGCGAAGGCAAACCGATGGACCGGCTGGTCTGCGGCGATGTTGGCTTCGGCAAGACGGAAGTCGCCCTGCGCGCAGCCTTCGTCGCGGCGATGGAGGGGCAGCAGGTTGCGGTGGTCGCCCCCACCACCCTTCTCGCCCGCCAGCATTACGAGAACTTCTCCGCCCGCTTCAACGGCTTCCCGATCAAGATCGGCCGCCTCTCCCGCCTCGTGCCGCCCAAGGAAGCATCCGAGACGCGTGACGGGCTGGCGGACGGCACGGTGGACATCGTGGTGGGCACCCATGCGATCATCGCCAAGCAGGTGGAGTTCAAGCGGCTTGGTCTGGTGATCGTGGACGAGGAACAACGTTTCGGCGTGAAGCACAAGGAACGGCTCAAGGAATTGAAGGCCGACGTCCACATGCTCACCCTCACCGCCACCCCCATCCCCCGCACCTTGCAGATGGCGATGAGCGGATTGCGCGAACTCACCACCATGCAGACCCCGCCGGTCGACCGCCTCGCCGTGCGCACTTATGTGATGGAATGGGACGAAGTGGTGATGCGCGAGGCGCTGCTGCGCGAACATCACCGTGGCGGGCAGAGCTTCATCGTTGTGCCGCGCATTGCAGACCTGCCGGACATCGAAGACTGGCTGCATAAGGCCGTGCCGGAAGTGAAATACATTTCCGCCCACGGCCAGATGGGCGCCCGCGAAGTGGAAGAGCGCATGGCCGCCTTCTACGAGCGGCGATACGATGTGCTGCTATCCACCACCATCGTGGAAAGCGGCCTCGACATTCCCAGCGCCAATACGATCATCATCCATCGTGCGGATCGGTTCGGCCTCGCCCAGCTCTATCAGCTGCGCGGCCGCGTGGGCCGGTCCAAGCTGCGCGCCTATGCCTATCTTACCCATCCGCAGGACCAGCAGCTTTCCGAAGTCGCGGAAAAACGGCTGAAGGTGCTGGGCGATCTCGACGGATTGGGCGCGGGCTTTCAGCTGGCCAGCCATGATCTCGATATTCGCGGCGCAGGCAATCTGCTGGGTGACGAGCAATCGGGCCATATCCGCGAAGTCGGCTTCGAACTTTACCAATCCATGCTGGAAGATGCGATCCTGGCCGCCAAGGCCGGCGACATGGGGCTCGAGCGTGACAATAGCGGCCTGTCGCCCCAGATCACGGTCGATGCGCCGATCATGATCCCGGACGATTACGTGCCGGACCTTGCCGTGCGCATGGCGCTCTATCGCCGCCTGAACGACGCCAAGGGCAAGGAAGAACTGGATTCGCTGGCCGCTGAGATGATCGACCGGTTTGGCCCCTTGCCCTCTCCCACCGAGAATCTCGTCAAGCTCATCGAGATCAAGCAGCAGGCCATCGTGGCCAATATCGCCAAGGTAGATGTCGGCGCACGCGGCACTCTGGTGACGTTCCACAAGGACAATTTCCCCGATCCTGCTGGCCTGCTCGCCTATGTCGAACGCCTGCAGGGCACCGCGCGTCTGCGGCCCGACATGAAGCTGGTGATCGAGCGCGCATGGGGCGATCCGAAGTCGCGCCTCAACGGCCTCTATCAGCTGACCAAGGGGCTTTCGGGCATTGTGAAGCGAGCGACAAAGCCGGGATGA
PROTEIN sequence
Length: 1167
VFAAKNPMPDFQRILSARSPLTLASVARGAQPLVLADLARASKGRAVFVAPDDTAMRAVADAAAFFAPELEVIEFPAWDCLPYDRASPALSISSQRLAALHKLQRGKKNGQLLVTTVNALLQRVLTPFRIRESVREIVPGMQIGHESLIALLQRQGYSRTDTVIDAGEFAVRGSVFDIFPSGFEGGLRLDFFGDELESLRLFDPSTQRSTGIVEGHLLLPASEALLDEDTVKRFRTRYREMFGANATGDPLYQAVSDGRRLAGMEHWLPLFEDKLTTLFDHLSDDDVILIDNAAMGSADERLGDIEDYHQARVEASGQAAGSYRPLASNALYLSRDEFTEHLSGWPVHKADIFAQPESASVIDFAFSSARDFAPERARGDNVYEAAARHLNSIGKAGRKPLIAAYSQGSRARISSILAEQGAEPRLADTWQEALGLAAKGAPVAVVLPLETGFANAEMEVVTEQDMLGDRLVRRRKRRKDADAFLAELSALNAGDLVVHIDHGIGKYLGLEAIAVGKSQHDCVMLEYAGGDKLYIPVENIDVLTRYGSSDEALPLDRLGGEAWQKRRAKLRERIQAIAAELLRTAALRALRTAPALVPDESGYNQFVERFPWQETEDQERAIEDVLHDLGEGKPMDRLVCGDVGFGKTEVALRAAFVAAMEGQQVAVVAPTTLLARQHYENFSARFNGFPIKIGRLSRLVPPKEASETRDGLADGTVDIVVGTHAIIAKQVEFKRLGLVIVDEEQRFGVKHKERLKELKADVHMLTLTATPIPRTLQMAMSGLRELTTMQTPPVDRLAVRTYVMEWDEVVMREALLREHHRGGQSFIVVPRIADLPDIEDWLHKAVPEVKYISAHGQMGAREVEERMAAFYERRYDVLLSTTIVESGLDIPSANTIIIHRADRFGLAQLYQLRGRVGRSKLRAYAYLTHPQDQQLSEVAEKRLKVLGDLDGLGAGFQLASHDLDIRGAGNLLGDEQSGHIREVGFELYQSMLEDAILAAKAGDMGLERDNSGLSPQITVDAPIMIPDDYVPDLAVRMALYRRLNDAKGKEELDSLAAEMIDRFGPLPSPTENLVKLIEIKQQAIVANIAKVDVGARGTLVTFHKDNFPDPAGLLAYVERLQGTARLRPDMKLVIERAWGDPKSRLNGLYQLTKGLSGIVKRATKPG*