ggKbase home page

scnpilot_p_inoc_scaffold_3652_3

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 626..1585

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 319.0
  • Bit_score: 487
  • Evalue 1.50e-134
Pseudouridine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3R7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 319.0
  • Bit_score: 487
  • Evalue 1.10e-134
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 321.0
  • Bit_score: 439
  • Evalue 9.60e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGGGGCCGAGAACATCATTACCGGCGTGCTGGAAACAGGCGGCGAGCGGCTGGACAAGGCTCTGAGCGCCGCCAGCGGGCTTTCGCGTGAGCGCGTGAAGGCCCTGATCGGCGAAGGCCGCGTCAGCCTTGCCGGGAAAGCCGCCAGCAGCGCCTCCGCCAAACCCGCAGCGGGAACTGCCTGGTCGATCGATGTCCCCCCTGCCGTTGAGGCGAAGGCCCGGCCGCAGGACATTCCGCTGGCCGTGGTGTTCGAGGATGAGCATTTGATCGTGATCGACAAGCCAGCCGGGCTGGTCGTCCACCCCGCCGCCGGCAATCCCGATGGCACGCTGGTCAATGCCCTGCTCCATCACTGCGCCAATAACGGGGGCGGTCAGCTTTCCGGCATTGGCGGAGTCGCCCGGCCGGGCATCGTCCACCGGATCGACAAGGATACCTCCGGCCTGCTGGTCGTGGCCAAGAGCGATGCGGCTCATATCGGCCTTGCCGAACAATTCGCGGATCATTCCATCGAGCGCGCCTATCTGGCCGTGGTCGCAGGGCATCCCCGCCCCCTGTCCGGCACAGTGAACGCGCGGGTCGGACGGTCCGATTCGAACCGCAAGAAGATGGCCGTGCTGGCCGACGATGCCAGCCGGGGCAAACATGCCGTTACCCATTACAAGGTTTTGAAAGAGCTTGATAATTCCGCTTTGGTCGAATGCCGTCTGGAAACGGGCCGCACTCATCAGGTGCGCGTTCACATGGCATCAATCGGCCATGCCCTATTAGGGGATCCTGTCTATGGCCGAACTCCCGCCCCCTTGCGCCCGCTCCTCAAGCGACTCGGTTTCGAGCGGCAGGCACTGCATGCGGCGGTGCTCGGCTTTGAACATCCGGTAACCAGAAAAACTATGCGGTTCGAAAGTGAATTACCGGCAGATATGAGGGAACTTATCGACGAAACCACTCGTTGA
PROTEIN sequence
Length: 320
MGAENIITGVLETGGERLDKALSAASGLSRERVKALIGEGRVSLAGKAASSASAKPAAGTAWSIDVPPAVEAKARPQDIPLAVVFEDEHLIVIDKPAGLVVHPAAGNPDGTLVNALLHHCANNGGGQLSGIGGVARPGIVHRIDKDTSGLLVVAKSDAAHIGLAEQFADHSIERAYLAVVAGHPRPLSGTVNARVGRSDSNRKKMAVLADDASRGKHAVTHYKVLKELDNSALVECRLETGRTHQVRVHMASIGHALLGDPVYGRTPAPLRPLLKRLGFERQALHAAVLGFEHPVTRKTMRFESELPADMRELIDETTR*