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scnpilot_p_inoc_scaffold_3652_12

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(7854..8558)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 234.0
  • Bit_score: 423
  • Evalue 2.60e-115
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y848_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 234.0
  • Bit_score: 423
  • Evalue 1.90e-115
  • rbh
clpP; ATP-dependent Clp protease proteolytic subunit similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 234.0
  • Bit_score: 409
  • Evalue 7.80e-112

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGATCGACCTGTTCGGCAATATCGGCGAAACCTACGGCACTCAGGGCCAGTTCACTCGCGATCCGTTCACCGGCGCGCTGGTTCCCGTCGTGGTCGAACAGACCAGCCGGGGCGAACGCAGCTTCGACATCTTCAGCCGCCTGCTGCGCGAACGTATCGTGTTCGTGACCGGTCAGGTGGAAGACAACATGGCCTCGCTGATCGTGGCCCAGCTGCTGTTCCTGGAGAGCGAAAATCCCTCCAAGCCCATCAGCATGTATATCAACTCGCCCGGCGGCGTGGTGACGGCGGGCATGGCGATCCATGACACGATGCAATACATCAAGCCGCGCGTCAGCACGGTCTGCATCGGCCAGGCCGCATCCATGGGCAGCTTCCTGCTCTGCGCGGGCGAGCCGGGCATGCGCATCGCGCTGCCTAATGCGCGGATCATGATCCACCAGCCTTCGGGCGGTGCGCGCGGCATGGCTTCGGATATTGAAATCCAGGCCAAGGAAATCCTGCGCATCCGTTCGCGGATGAACGACCTTTATGTGAAATATACCGGCCAGCCGCTCGAAGCGATCGAGAAGGCGCTGGATCGCGATACGTTCCTTGAAGCCGATGAAGCGCTGAAATTCGGCCTTGTGGACAAGGTGTTCGAGACTCGTCCCGAGACCGAAGCCACCGGCGATGAAAGCGGTTCGGGCGGCGCGCCTGAATAA
PROTEIN sequence
Length: 235
MIDLFGNIGETYGTQGQFTRDPFTGALVPVVVEQTSRGERSFDIFSRLLRERIVFVTGQVEDNMASLIVAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLCAGEPGMRIALPNARIMIHQPSGGARGMASDIEIQAKEILRIRSRMNDLYVKYTGQPLEAIEKALDRDTFLEADEALKFGLVDKVFETRPETEATGDESGSGGAPE*