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scnpilot_p_inoc_scaffold_3395_8

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 8170..8493

Top 3 Functional Annotations

Value Algorithm Source
UPF0060 membrane protein Sala_0701 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Y701_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 107.0
  • Bit_score: 194
  • Evalue 6.50e-47
UPF0060-family membrane protein similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 200
  • Evalue 2.50e-49
UPF0060 membrane protein SKP52_05175 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 200
  • Evalue 1.30e-48

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGACCGCATTTGCCTATATTTTCGCTGCTCTTGCCGAGATTGCCGGATGTTTCGCCTTCTGGGCGTGGCTGCGGATGGATAAATCTCCCCTCTGGCTGGTGCCCGGCATGGCCTCCCTCGCCTTGTTCGCCTGGCTGCTGACGCTGATCGACAGCGATCACGCGGGCCGCGCCTATGCCGCCTACGGCGGGGTCTACATCGTTTCCGCGCTCGCCTGGCTATGGGCCGTGGAAGGCGCCCGGCCCGATCGCTGGGATCTGATCGGCGGCGCAGTGTGCCTGGGCGGGGCCGCAATCATTCTGTTCGGCCCGCGCGCGGCCTGA
PROTEIN sequence
Length: 108
MTAFAYIFAALAEIAGCFAFWAWLRMDKSPLWLVPGMASLALFAWLLTLIDSDHAGRAYAAYGGVYIVSALAWLWAVEGARPDRWDLIGGAVCLGGAAIILFGPRAA*