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scnpilot_p_inoc_scaffold_4507_2

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(218..1081)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ37_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 277.0
  • Bit_score: 424
  • Evalue 7.80e-116
  • rbh
Tyrosine recombinase XerD {ECO:0000313|EMBL:AKH41776.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 276.0
  • Bit_score: 432
  • Evalue 5.30e-118
integrase similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 293.0
  • Bit_score: 422
  • Evalue 1.10e-115

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCTCGCTGCCGAGCGTGGGGCGGCGGCGAATACGCTGGCGGCCTATCGCCGGGATCTGGAGGGTGCGGAAGAACTGCTCGGCAATCTTGAGCGCGCAGACAGGGAGGCTCTCGCCTCGCTCGGCACCCGTTGGGCCTCGCTTGCGCCCGCCACGGTAGCTCGCAAAAGCTCGGCTTTGCGCCAGTTTTATGGCTTTCTTCAGGATGAGGGACTGAGGAAGGACGACCCTTCCTCGGCACTGCCAAACCCGCCCGCAAGGCGCGCATTACCGAAGATTCTCAGCCATGAGGAAGTGGCCAGCCTGTTTTCCCGTGCGGAGGAGGAGGCGGAAAGCGGACGGATGGATACAGTCCGGCTGCTGACGCTGCTGGAAATGCTCTATGGCTCCGGCCTGCGCGCCACCGAACTGGTTTCGCTGCCTCTTTCCGCCGTTCCGCGCGATGCCCCGTTCCTGACCGTCACCGGCAAGGGCGGTGTTTCCCGCATGGTGCCGGTTTCCGCGCGGGCAAGGCAGGCGCTCTCCCGCTGGCTGGAAGTGCGGCAGGGAGAAGGGCGCTATCTCTTTCCCTCCCGCGCCAAGCATCTCAGCCGCATTCGCCTCTACCAGATGCTCAAGGAATTGGCCCTTCGCGCAGGGCTGGCGCCGGAAAAGCTGAGCCCGCACGTGCTGCGCCATGCCTTTGCCACTCATCTGCTGGAAGGTGGGGCGGATCTGCGGGTTTTGCAGACATTACTGGGACATGCGGATATCGCGACAACGCAGATATATACCCATGTCGATGCCGCGCGGCTGGTGGCGCTGGTGAATGAACGCCACCCTCTGAGCCGCGCCCCTCTTGCCCCGAAGGCTTCGGGCGACTAG
PROTEIN sequence
Length: 288
MLAAERGAAANTLAAYRRDLEGAEELLGNLERADREALASLGTRWASLAPATVARKSSALRQFYGFLQDEGLRKDDPSSALPNPPARRALPKILSHEEVASLFSRAEEEAESGRMDTVRLLTLLEMLYGSGLRATELVSLPLSAVPRDAPFLTVTGKGGVSRMVPVSARARQALSRWLEVRQGEGRYLFPSRAKHLSRIRLYQMLKELALRAGLAPEKLSPHVLRHAFATHLLEGGADLRVLQTLLGHADIATTQIYTHVDAARLVALVNERHPLSRAPLAPKASGD*