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scnpilot_p_inoc_scaffold_5939_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(6068..6739)

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXS8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 223.0
  • Bit_score: 394
  • Evalue 5.20e-107
Putative two-component response regulator {ECO:0000313|EMBL:GAD47308.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 223.0
  • Bit_score: 394
  • Evalue 7.30e-107
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 222.0
  • Bit_score: 378
  • Evalue 1.40e-102

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
AAAACCACCGAGGGCAAGATCGAGCTGGCCAGCGGGGGCACTTTGTTCCTCGACGAAGTGGGCGATATTCCCCTGCCGCTGCAGGTAAAGCTGCTGCGCTTCCTGCAGGAACGCACGATTGAGCGGATCGGCGGGCGCAAATCCATCGCCGTCGATACGCGCATTGTCTGCGCCACCCATCAGGATCTGGAAGCGATGATCGCCGATGGCCGCTTCCGCGAGGATCTGTTCTATCGTCTGGCCGAGATCGTGGTGAAAATCCCCTCGCTGGCGGAACGTCCCGGTGATGCGACTTTGCTGGCCAAGGCTTTCCTCAAGCGTTTCGCGCGGGAAATGAACCCCGGGGTCAAGGGCTTTGCTGCCGATGCGCTGGCCGTGATCGATGCGTGGAAATGGCCCGGCAATGTGCGCGAGCTGGAAAACCGGGTGAAGCGCGCGGTCATCATGGCGGATGGCAAGCTTATCAACGCCGCCGATCTCGACCTTGAAGGGGCGGAGGATGACGACAGCCAACCGCTCAACCTCAAGAGCGCGCGTGAACAGGCGGACCGGCGGGTAATCCGCCACGCATTGGCACGCAGCGAAGGCAATATTTCCAACACGGCCAAGCTGCTGGGGATCAGCCGGCCCACGCTTTACGATCTCCTCAAGCAGTATGACCTCCACGCCTGA
PROTEIN sequence
Length: 224
KTTEGKIELASGGTLFLDEVGDIPLPLQVKLLRFLQERTIERIGGRKSIAVDTRIVCATHQDLEAMIADGRFREDLFYRLAEIVVKIPSLAERPGDATLLAKAFLKRFAREMNPGVKGFAADALAVIDAWKWPGNVRELENRVKRAVIMADGKLINAADLDLEGAEDDDSQPLNLKSAREQADRRVIRHALARSEGNISNTAKLLGISRPTLYDLLKQYDLHA*