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scnpilot_p_inoc_scaffold_5237_8

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(6579..7361)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 260.0
  • Bit_score: 346
  • Evalue 2.60e-92
tRNA modification GTPase MnmE n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2F8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 260.0
  • Bit_score: 346
  • Evalue 1.90e-92
tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 260.0
  • Bit_score: 330
  • Evalue 5.10e-88

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GCGCGCGTGGAGGCGGTGCTCGATTTTGCAGATGAGGATGACGTTGCCGTCCTGCCTCCGGACTTTGTTGCCGAAATCAGCGAGCTTGCCGGGGAAATCGCAGAGGCCCTTGATGCGCCTCGGGCCGAGACGTTGCGGGAAGGGTTTCGCGTGGTTCTCGCCGGCCCGCCCAATGCTGGGAAGTCCACCCTTTTTAACGCTTTAGTCGAGAGCGAAGCGGCGATTACTTCACCTAGTGCTGGCACGACCCGTGACGTTCTTGTGTACCCGGTCGCGCTGGCGGGGCTTCCTTTCAGCTTCATCGATACGGCCGGTTTGCGAGAGGAGGGAGCGGGAGAGATCGAGGCGATTGGTATTGCTCGGGCTCAGGCAGAACTGGAGAAAGCGGATCTTGTTCTGTGGCTTGGGCCCGAAGGGGAGGGCCCAGGGGATGCGTGGGAGATCGAAACGCAGATCGATGTAAAAGGTCACCCGTCCAAGGATGGGCCTCGTCATCGCGTCTCCGGATTGACGGGTGAGGGGGTTGTGAGTCTGAAGCAGGATCTCGTTGCTGTCGCGCGTGAAGCAATGCCTCGGCCGGGACAGGCAGCCTTGAACTTGCGGCAACGGAATTTGCTTGGCGATGCTTTTGCGGCTCTCGGCAGTGCGGCAGGGGAGGACGATCCGCTGTTATTGGCGGAGCAGCTTCGATTGGCCCGCCTGTCTTTCGATCGACTGATTGGGCGTTCGGCCACGGAAGATATGCTGGATGCCCTGTTTGGACGATTCTGCATCGGCAAGTGA
PROTEIN sequence
Length: 261
ARVEAVLDFADEDDVAVLPPDFVAEISELAGEIAEALDAPRAETLREGFRVVLAGPPNAGKSTLFNALVESEAAITSPSAGTTRDVLVYPVALAGLPFSFIDTAGLREEGAGEIEAIGIARAQAELEKADLVLWLGPEGEGPGDAWEIETQIDVKGHPSKDGPRHRVSGLTGEGVVSLKQDLVAVAREAMPRPGQAALNLRQRNLLGDAFAALGSAAGEDDPLLLAEQLRLARLSFDRLIGRSATEDMLDALFGRFCIGK*