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scnpilot_p_inoc_scaffold_4173_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2..1600)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter AcrB n=1 Tax=Sphingobium xenophagum RepID=UPI00035E5FFF similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 536.0
  • Bit_score: 844
  • Evalue 4.50e-242
Cobalt-zinc-cadmium resistance protein czcA {ECO:0000313|EMBL:GAO53635.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 536.0
  • Bit_score: 845
  • Evalue 4.80e-242
acriflavin resistance protein similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 536.0
  • Bit_score: 821
  • Evalue 1.20e-235

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAATTTGGGCATTTCCGGGCGGTTGACCCGGGCGACTATCCAGTCGCCGCTCACCCCGCTGTTGCTGCTGGCGGCGATCCTGGTCGGCGTGATCGCCACGCTGACCATTCCGCGCGAGGAAGAGCCGCAAATCTCTGTTCCTATGGTGGACATCCGCGTCGCCGCGCCCGGCCTTTCGGCCAGCGATGCGGTGGAAGTGGTGGCCAAGCCGCTGGAAACCATCGTCAAGAGCGTGGACGGGGTGGAGCATGTCTACACCCAGGCGGAAGACAATGGCGTGCTGGTGACGGCGCGCTTCATCGTCGGCTCCAATCCTGAAGACGCGGCGACCCGCATCGACGAGAAGCTCAATGCCAATATGGACCGCATCCCTGTGGGCATTCCGGCCCCGCAGGTGACGGTGCGCGGCATCAATGATGTGCCCATTGTGGTTCTCACTTTGTCGCCCAAGCCCGGAGCGCCGGGTGCATGGAGCGAACAGGCCTTGGGGGAACTTGCCGGGCGGCTGCGGACCGAAATCGCCAAGGTGGACGATGTCGGGCTGACCTTCATCACCGGCGGCCAGCGGCAGGCTGTGCGGATCGCGCCCGATCCCGCGAAATTGCAGCTCCATCAGGTGCCGCTGGGCAATCTGATCGAGGCGGCGGGGCAGGCCAATCGCGCCTTTCCGGCTGGCAATGTGCGTGAAGCGGGGCAGGCCGCCGATGTGGTGGCCGGTCGCACGCTTTCCGGCGCGGAAGAAGTCGGCAATCTGCAGGTCCGCTCCGTCACGGGCGCGCCCGTCTATATGCGCGATGTAGCCAGTGTCACCGAAGCGCCGACGCAGGATCAGCAGATGGTCTGGCGCTGGGCTAAAGAGGATGGGGAGGGCGCCAAATGGGGCCGCACTCCCGCCGTCAGCATTGCCATTGCCAAGCGCGCCGGAGCCAATGCCGTAACCGTCTCGGAAGCGGTGGTGAAGCGCGTGGAAACGCTGGAAGGCACGCTGATCCCGACTTCGCTGAATGTCGCCGTCACGCGCAATTACGGCGAAACGGCGAATGAGAAGGCGAACGAACTGCTGTTCCACCTCGCTCTCGCCACGGTCTCTATTGTGGTGCTGATCGGCTTTGCCATCGGCTGGCGCGAGGCCGGGGTTACGGCCATTGTCATTCCCACCACCATTCTGCTCACCATGTTCGCATCGAACATTATGGGCTTCACCATCAACCGGGTCAGCCTGTTTGCGCTGATTTTCTCGATCGGCATTCTGGTGGACGATGCCATCGTGATGATCGAGAATATCGCCCGGCATTGGGCCATGCTGGATGATCGGCCGCGTATGCAGGCCGCTGTGGAGGCCGTGGCGGAAGTGGGTAATCCCACCATTGTCGCCACCATGACCGTGGTGGCCGCCCTGTTGCCGATGCTGTTCGTCTCGGGCCTGATGGGCCCCTATATGGCGCCGATCCCGATCAATGCCTCCGCCGCGATGATCTTCAGTTTCTTCGTGGCGGTCATCATCGCGCCCTGGCTGATGATCCGCTTTGCGCGGCAGACGCTGGATCATGGCGGGCATGACGAGCATGGCGGGAAGCTGGGCCAATATTACGCCCGC
PROTEIN sequence
Length: 533
MNLGISGRLTRATIQSPLTPLLLLAAILVGVIATLTIPREEEPQISVPMVDIRVAAPGLSASDAVEVVAKPLETIVKSVDGVEHVYTQAEDNGVLVTARFIVGSNPEDAATRIDEKLNANMDRIPVGIPAPQVTVRGINDVPIVVLTLSPKPGAPGAWSEQALGELAGRLRTEIAKVDDVGLTFITGGQRQAVRIAPDPAKLQLHQVPLGNLIEAAGQANRAFPAGNVREAGQAADVVAGRTLSGAEEVGNLQVRSVTGAPVYMRDVASVTEAPTQDQQMVWRWAKEDGEGAKWGRTPAVSIAIAKRAGANAVTVSEAVVKRVETLEGTLIPTSLNVAVTRNYGETANEKANELLFHLALATVSIVVLIGFAIGWREAGVTAIVIPTTILLTMFASNIMGFTINRVSLFALIFSIGILVDDAIVMIENIARHWAMLDDRPRMQAAVEAVAEVGNPTIVATMTVVAALLPMLFVSGLMGPYMAPIPINASAAMIFSFFVAVIIAPWLMIRFARQTLDHGGHDEHGGKLGQYYAR