ggKbase home page

scnpilot_p_inoc_scaffold_4199_7

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 3223..4509

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B51F9A similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 395.0
  • Bit_score: 414
  • Evalue 1.20e-112
  • rbh
Transmembrane protein {ECO:0000313|EMBL:GAO56748.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 391.0
  • Bit_score: 443
  • Evalue 3.40e-121
low temperature requirement A similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 385.0
  • Bit_score: 356
  • Evalue 8.40e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGGCGCTCCTGCCCGGCTCTCTTCTGCGCGATCCCGCCGGGCATGAGGTCCGGGTCAGCTATCTCGAGCTGTTCTTCGACCTCGTTTACGTCTTTGCCATCACGCAGATTTCGCATTTCCTGCTGGCCCATCACGGCATAGCCGCGCTGGCCGAAGCACTGGTGATCTTCGCGGCGATCTGGTGGGCCTGGGTCTATACGACTTGGGCCGCCAACTGGCTCGATCCCGACAGGGTGCAGGTGCGGATCGTGCTGCTGCTGACCATGCTGGCCAGCCTCATCATGGCAGTCGCCACGCCCAAGGCATTCGGGGACCACGGGCTGATCTTCGCCTGTGCCTATCTTGCTATACAGATCGGTCGCTCCGCCTTCGTCGCCGTGGCCATGACCCGCGGCGGCCATGAAGCGGCCGGCACCATGCAGCGGATCGTGATCTATTTTCTGATCAGCGGCTGCCTGTGGATCGCAGGAGCGCTCGCCCCGCAACAGGAAGTGCGCCTGCTCTGGTGGGCGGCGGCATTGCTGATCGAATATTCCGGGCCAAGCACGGGCTACAGGCTCCCCTTTGCCGGCAGAGTAATGCCCAGCGACTGGCGGATTTCCGGCGGGCACATGGCCGAACGCTGCGCCCTGTTCGTCATCATCGCATTGGGCGAAGGGATCGTGGTGACAGGCGCCACCTTTGCCGGACAGGAATTCGCGCTGGCCAACAGCGCCGCCTTCCTCGCCGCCTTCACCGGCTCGGTGCTGATGTGGTGGATCTATTTCGATGTCGGCGCGCAGCGTGGGGCGGAGTTGATCGAGCATCATCCCGAACCGGGCCGGATCGCCCGCAGCGCCTTTACCTATCTCCACATGCCGATTGCCATGGGCATGATCGGCTCAGCCGTGGCGGATGAGATGCTGCTGGCCCACCCCGATGGCCATACGGAGCCCGCGCTGGTGTTGGCCGTCTGCGGGGGGACGGGCATCTACCTGCTGGGCGTGGGCCTGTTCAAACGCTTCGCCAATCCCTTCCGCACCTTCCCGATGTCACACCGCTTCGGGCTGGGAATGTTCATCCTGCTCGCCCTGTGGGGCATGTTCGCCCATCCGCCCGCGCTCGCCTTTGGCTGGGCATCGGTGCTGATCCTGGCGCTGGTCAGCGTGTGGGAATGGCTGAGCTTCCACGGCGGGCTGGTGGAGCGCCTTGGCCCCCGTTTCGGCCCCTTCGGGCGCTATCTGCAACGCCGGGCGGTGCGGGCGGAAGCCGAAAGGGAGCGGCGCTTCGGCGGGAAGCCGGATTAA
PROTEIN sequence
Length: 429
MALLPGSLLRDPAGHEVRVSYLELFFDLVYVFAITQISHFLLAHHGIAALAEALVIFAAIWWAWVYTTWAANWLDPDRVQVRIVLLLTMLASLIMAVATPKAFGDHGLIFACAYLAIQIGRSAFVAVAMTRGGHEAAGTMQRIVIYFLISGCLWIAGALAPQQEVRLLWWAAALLIEYSGPSTGYRLPFAGRVMPSDWRISGGHMAERCALFVIIALGEGIVVTGATFAGQEFALANSAAFLAAFTGSVLMWWIYFDVGAQRGAELIEHHPEPGRIARSAFTYLHMPIAMGMIGSAVADEMLLAHPDGHTEPALVLAVCGGTGIYLLGVGLFKRFANPFRTFPMSHRFGLGMFILLALWGMFAHPPALAFGWASVLILALVSVWEWLSFHGGLVERLGPRFGPFGRYLQRRAVRAEAERERRFGGKPD*