ggKbase home page

scnpilot_p_inoc_scaffold_5400_7

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 6657..7214

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 186.0
  • Bit_score: 309
  • Evalue 3.30e-81
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 187.0
  • Bit_score: 292
  • Evalue 8.50e-77
Formamidopyrimidine-DNA glycosylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKT2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 187.0
  • Bit_score: 308
  • Evalue 5.30e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCCGGAACTGCCCGAAGTTGAGACTACCGTGCGCGGACTTGCCCGTTTCCTGGAAGGGAAACGGATAGAACGCGTGGCCGTGAATCGGCCCGATTTGCGCCGCCCCTTTCCGCCCGATCTCGTCCAGTCGCTCACCGGGGCGACAGTCACGGGGCTGGGCCGCAGGGCGAAATACGGCCTGATCCACACGGATCGCGGGCAGACCATGGTGTTCCATCTGGGCATGAGCGGACGCTGGCGGATCGATCCGGCAGAGCAGGGCACGCATGACCATCTGCTGATCGAGACGGCAGGCCATCTCTTCGCCCTCAACGATGCACGGCGTTTCGGCTCGGTAGATCTCGTCGATACGGCGGCGTTGCAGGCATGGCCGCAATTCGCCGTCATGGGGCCCGAGCCGCTGGGCGAGGATCTGACGCCTGCCCATCTGCGCGCCGCACTGGCGGGCCGTTCCCAGGCGATCAAGCTCTTGCTGCTGGACCAGCGGATCGTGGCGGGCCTGGGCAATATCTATGTGTGCGAGGCGCTTTACCGTTCGGGCATCAGCCCGCAGCGT
PROTEIN sequence
Length: 186
MPELPEVETTVRGLARFLEGKRIERVAVNRPDLRRPFPPDLVQSLTGATVTGLGRRAKYGLIHTDRGQTMVFHLGMSGRWRIDPAEQGTHDHLLIETAGHLFALNDARRFGSVDLVDTAALQAWPQFAVMGPEPLGEDLTPAHLRAALAGRSQAIKLLLLDQRIVAGLGNIYVCEALYRSGISPQR