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scnpilot_p_inoc_scaffold_5741_7

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 5263..6918

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B31FDA similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 558.0
  • Bit_score: 488
  • Evalue 6.50e-135
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KFL46010.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 535.0
  • Bit_score: 762
  • Evalue 4.30e-217
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 582.0
  • Bit_score: 439
  • Evalue 1.30e-120

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Taxonomy

Sphingobium sp. ba1 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGCCTTACGGCCTTTCGCCGCGCGCGTTCCGCGCCGGTGCTGCAAATCTTGCGATTGCCGTTTCTCTCCTCGCAGGCGGCACTGCCTTTGCCCAGGACGAGGCCAGCAGCCAGCAGGGCGGTGTCCACGAAATCGTGGTGACGGCTCAGTTCAAGAGCCAGAACATCCAGGAAACCCCGCTGGCGATCACCGCGGTCGATTCCACCCTGATGGAAGCCCGCAACCAGACCAATGTGCAGGATGTTGCCCAGCGCGCGCCCAGCGTCAGCTTCACTGCCGGCGGCCAGGGCGGCGGCGCCCAGACCGCAGCCGCGAATATCCGCGGCATCGGCCAGAGCGACTTCCAGTTCCCCAACGAACCCGGCGTCGGCATCTATATCGACGATGTCTATTACGGCATTTCCTTTGCCAGCGCCTTCGATCTGGTCGACCTTGACCGCGTCGAGATCCTGCGTGGCCCGCAGGGTACGCTTTCGGGCAAGAATTCCATCGGCGGCTCGATCAAGCTGTTCAGCCGCAAGCCCTCCGACGATCCGGACGCCTATATGGAAGCGACGGTCGGCTCCTTCGGTCGCCTCGGCCTGAAGGCGGCGACCAATGCCACCATCGTGCCCGACAAGCTCTATCTGCGCCTGACCGGCGTGGGCAAATATGTCGACGGCTATCTCAAGCGCCTCGATTATGAATGCGTTACCGGCAAGACTGCCCCCGGCGGCGTGCAGGCATCGCCCGCGGAAGATTGCGTGATCGGCACCGAAGGCGGCCAGAACGTGCTTGCCGCACGCGGCGCGCTGCGCTGGATCGTCAATGACCGGATCGAGAACAACTTCATCGCCGACGTCACGCGTGACCGTTCGGAAGCCTCGCCGGGCAAGGCCATCTTCCTGCCGCCCATCAACGGCAATGATTACGTCACCGGGCCGGAAGAATACACCAACTACTCCACCTATACCGGCTATCCGGGTCAGGCGGACCAGTACACCAACCCGGCGATCAGCTATGTCAATTCCTGGGGCTTCTCGAACAATCTCGAAATCGGCCTGAGCGACAATGTCACGCTGACCTCGATCACCGCCTTCCGCCATGCGGATGGCAAGAGCTCCTGGGATGCCGACAACTCGCCCGAGAACCTCTCCAACAACACCACCATCTTCGATCATGATCAGTTCACCCAGGAACTGCGCCTTTCGGCCAGTCTGGGCGAGATGTTCGACGTGACGGTGGGCGGCTATTACTACAAGGGCGACAGCCGCATCGGCGGGCGCGTGAATGTGGGCGCCGCCGGGCTCGACTTCGTTTCGAACGATCCGTTCAAGCAGACCTCCAAGTCCGCTTTCATCCACGGCGTGATGCACATTACCGATCAGCTGAACCTGACCGCTGGCGTGCGCTATACGGACGAGAACAAGACCTATACCTTCAGCCGCACCAACCCCAATCCGAGCCTGCCCACCGATCCGCGCGTGGCCTCGCTGGACGGGCTGACCAAGACCTTCTCGGGCGACAATATCGACTGGCGCGTGGCGCTGGACTACGAAGTCCTGCCCGACATCCGTTTCTACGGACAGGTTGCAACGGGCTTCAAGGGCGGCGGGATCAACCCGCGTCCCTATCTGGAAATGCAGGCCGTTCCCTACGCGCAGGAAAAGGCCACT
PROTEIN sequence
Length: 552
MPYGLSPRAFRAGAANLAIAVSLLAGGTAFAQDEASSQQGGVHEIVVTAQFKSQNIQETPLAITAVDSTLMEARNQTNVQDVAQRAPSVSFTAGGQGGGAQTAAANIRGIGQSDFQFPNEPGVGIYIDDVYYGISFASAFDLVDLDRVEILRGPQGTLSGKNSIGGSIKLFSRKPSDDPDAYMEATVGSFGRLGLKAATNATIVPDKLYLRLTGVGKYVDGYLKRLDYECVTGKTAPGGVQASPAEDCVIGTEGGQNVLAARGALRWIVNDRIENNFIADVTRDRSEASPGKAIFLPPINGNDYVTGPEEYTNYSTYTGYPGQADQYTNPAISYVNSWGFSNNLEIGLSDNVTLTSITAFRHADGKSSWDADNSPENLSNNTTIFDHDQFTQELRLSASLGEMFDVTVGGYYYKGDSRIGGRVNVGAAGLDFVSNDPFKQTSKSAFIHGVMHITDQLNLTAGVRYTDENKTYTFSRTNPNPSLPTDPRVASLDGLTKTFSGDNIDWRVALDYEVLPDIRFYGQVATGFKGGGINPRPYLEMQAVPYAQEKAT