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scnpilot_p_inoc_scaffold_6730_3

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 4201..5634

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system outer membrane lipoprotein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFG5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 464.0
  • Bit_score: 598
  • Evalue 5.00e-168
RND efflux system outer membrane lipoprotein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 458.0
  • Bit_score: 599
  • Evalue 5.40e-168
transporter similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 475.0
  • Bit_score: 589
  • Evalue 8.60e-166

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Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAGGCGCGCGGCAGGCAAGATGATGCGCAAACCCGCCCTTCCGCTGCTGGCTCTGGTTCTGCCCGCCGCTTTGGGCGCCTGTTCCATGGCGCCGGACTATGCCCGGCCCGAAGCGCCAGTCCCCCCGGCATGGCCGGTGGGCGAAGCCTATCCGGTGGAGGGAGAGGCCAGCCTCCCCTCGGTTTCCTATACTGAGCTGTTCCGCGACCAGCGGCTGCAAAGCCTGATCGGGCAGGCGCTGGCCAATAATCGCGATCTGCGCATCGCCGCCGCGAATCTCGCCGCCGCCCGCGCGCAGGTGCGGGTAACGCGCGCCGCGCAATTCCCCGAACTTGCAATACGTGGCTCGGCCAGTGTCAGCGACAATGGCGGGACCAGCGGCGAAAGCTATGCCCTGCAGGGCGGCATCTCCAGCTTCGAGCTGGATCTGTTCGGCCGTCTGGCCAATGCCACGGCTGCCCAGCGCGAACGTGCTCTGGCCAGCGAAGCCTCTGCCCGCTCCGTACGGCTCAGCCTCGTCGCCAGCCTCGCCAGCGCATGGGCCACTTATGCGGCGGACCGCGATCTTCTGGCTGTTGCGGAAGATAGCGCGGCCAATGCCCGGCGCAGCGTGGAATTGACCCGGTCGCGGCTGCAAGGCGGAGTCGCCCCGCGATCCGACTTGCGGCAGGCCGAACAGATTCTCGCCACGGCCGAAGGCGATCTTGCGGCGCAAAAGGCCGCGCTGGCGGAAGACACCAATTTGCTGCGCCTGCTGGTGGGTGCGGACATCGATCCGGCCCTGCTGCCCTCCGGCCTTGCCGAAGTGCTGAGCAGCGTCGAAGCCCTGCCCGCCGGAACCAGCTCCACCGTGCTGCTGCGCCGCCCCGATGTGGCGCAGGCCGAATATCTGCTGCGCGCCGCCAATGCCGATATCGGCGTTGCCCGCGCCAAATTGTTCCCGCAGATTTCACTGACCGGCCTGCTCGGTTTTGCCAGCGATGCGCTCGGCTCTCTGTTCGACAGCGGCGCCTTTGCCGCTTCGGCTGGGGCCGATGCCAGCTATGCCATTTTCTCCGGCGGTGGGAAAAGCGCGGGCGTGGATGTGAGCGAGGCCAATCGCGATGCGGCCCTGGCCACTTACGAAAAGGCGATCCAGTCCGCCTTCCGCGAAGTGGCCGATGCGCTGGCTACCAAGGGCACGATTGCCGACCGCCTCAGTGCGGCGCGCATGAACACCGAAGCGGCCGCCGATACGGCCAACCTCACCGAACTGCGCTATCGCGGCGGCGTGGACAGCTTCCTCGCCAATCTGGTGGCGCAACGCAGCCTCTACACCGCGCGGCGGCAGGAAGTGGCGATCCAACTCATCGCGGTGCAGAACCGCATCGAGCTGTATCGCGTGCTGGGCGGCGATGCGGAACTGGGCCAGAGTGCTTTTACTTTGCCGTAA
PROTEIN sequence
Length: 478
MRRAAGKMMRKPALPLLALVLPAALGACSMAPDYARPEAPVPPAWPVGEAYPVEGEASLPSVSYTELFRDQRLQSLIGQALANNRDLRIAAANLAAARAQVRVTRAAQFPELAIRGSASVSDNGGTSGESYALQGGISSFELDLFGRLANATAAQRERALASEASARSVRLSLVASLASAWATYAADRDLLAVAEDSAANARRSVELTRSRLQGGVAPRSDLRQAEQILATAEGDLAAQKAALAEDTNLLRLLVGADIDPALLPSGLAEVLSSVEALPAGTSSTVLLRRPDVAQAEYLLRAANADIGVARAKLFPQISLTGLLGFASDALGSLFDSGAFAASAGADASYAIFSGGGKSAGVDVSEANRDAALATYEKAIQSAFREVADALATKGTIADRLSAARMNTEAAADTANLTELRYRGGVDSFLANLVAQRSLYTARRQEVAIQLIAVQNRIELYRVLGGDAELGQSAFTLP*