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scnpilot_p_inoc_scaffold_5971_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(4124..4645)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPS7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 173.0
  • Bit_score: 314
  • Evalue 9.00e-83
  • rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 173.0
  • Bit_score: 314
  • Evalue 1.30e-82
translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 173.0
  • Bit_score: 311
  • Evalue 1.60e-82

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGCTGACGCCCCCCGTTAAAAGCGGGCCGCGCTTCGACAATTTCATCCAGTCCGACAAGGTTCGCGTCATCGACGAGAATGGCGAGAATCTCGGCGTGATGTACACGAGCGAGGCAATCGAACAGGCGGCCGAAGTCGGCCTGAACCTGGTTGAGGTGTCGCCCAATGCGGATCCGCCAGTCTGCAAGTTCCTCGATGTGGGCAAGTATCGCTACGAGGCGCAGAAGAAGGCGAATGCTGCGCGCAAGACGCAGAAGACGCAGGAAATCAAAGAAATCAAGATGCGCCCCAACATCGACACGCATGATTATGACGTGAAGATGCGCAACGTGAACAAGTTCCTGCTGGAAGGCGACAAGGTGAAGATCACCCTGCGCTTCCGTGGCCGTGAAATGAGCCATCAGGAACTGGGCATGAACCTGCTCAAGCGGGTGCAGGAAGATGTGGCCGAGATCGCCAAGATCGAAGCCTATCCCCGACTTGAAGGCCGCCAGATGCTGATGGTCCTGTCACCGAAATAA
PROTEIN sequence
Length: 174
MLTPPVKSGPRFDNFIQSDKVRVIDENGENLGVMYTSEAIEQAAEVGLNLVEVSPNADPPVCKFLDVGKYRYEAQKKANAARKTQKTQEIKEIKMRPNIDTHDYDVKMRNVNKFLLEGDKVKITLRFRGREMSHQELGMNLLKRVQEDVAEIAKIEAYPRLEGRQMLMVLSPK*