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scnpilot_p_inoc_scaffold_5979_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 2904..3668

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKP1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 247.0
  • Bit_score: 209
  • Evalue 4.60e-51
Transcriptional regulator of iclR family {ECO:0000313|EMBL:GAO53520.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 253.0
  • Bit_score: 295
  • Evalue 8.90e-77
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 247.0
  • Bit_score: 209
  • Evalue 1.30e-51

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGACACAATCACCCAGCGGATCGGGAGAACGGCTGCTGCACATGATCCGGCTGATCGCATCCGGTCCGGACAGCTTCACCTTGGGCGAATTCGCTGAGCGGGCCCAACTGCCGCTTAGCTCGGTCCATCGCCTGCTGAAGACCCTGGAGGGGGCCGGCTTTGTCGAGAGAGGATCCGGCCAGAGTTATCGCCAGGGCCGTGAGCTGCGCAGGATAGCCTCCCTTATTGTATCCCGCTTCGACATTGGCCGCTGCGCCCGCGAGTTGCTCGAGGGGCTGGTCCGCGATTTCCATGAGACCGCCGTCCTGTGTGTCTACAGCCCCCCCACACATCGCGGCGTGATTGCCGAAGTGGTACTCACCCCCCACCCGTTGCGTTTTGCGATTGAAAAAGGGGCAAATGTTTCCCTGCCATGGGGGTCGCTCGGCCATGCGATCTTGGCATATCTGCCTCCTTCGGAAATAGAGCTGATCCTGCGCAGCGAGAATTCCGGACCACTCACTGGCAGGCCCCGCCCCACCCGGCAGGCCCTGGAAACCGAATTCGCCGCAATCCGCGAGAATGGCTACGCACTCTATTGCGAGGAAAATATTGATCTCGCCGGCATCGCAGCCCCGGTCTTCAGGGGCCCCGACGAAGTGCTGGGCGCCATCGGCATGATTCTGCCTTCCTCCCGCTACAATCTCCACATGCAGGGCGATCTGGCATTTGCCGTGCGCGATGCCGCGCAAGAACTGAGCAGGCAGGCAGAAATGAGCGGATGA
PROTEIN sequence
Length: 255
MTQSPSGSGERLLHMIRLIASGPDSFTLGEFAERAQLPLSSVHRLLKTLEGAGFVERGSGQSYRQGRELRRIASLIVSRFDIGRCARELLEGLVRDFHETAVLCVYSPPTHRGVIAEVVLTPHPLRFAIEKGANVSLPWGSLGHAILAYLPPSEIELILRSENSGPLTGRPRPTRQALETEFAAIRENGYALYCEENIDLAGIAAPVFRGPDEVLGAIGMILPSSRYNLHMQGDLAFAVRDAAQELSRQAEMSG*