ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_8674_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 3969..4898

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Ts n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J5M1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 306.0
  • Bit_score: 512
  • Evalue 2.40e-142
  • rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 306.0
  • Bit_score: 514
  • Evalue 8.70e-143
elongation factor Ts similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 306.0
  • Bit_score: 502
  • Evalue 6.90e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGCTGCTTATACTGCCGCTGACGTGAAAGCCCTGCGCGAGCGCTCTGGCGCCGGCATGATGGACTGCAAGAAGGCTCTCGACGAGACCAATGGCGACATCGAGGCTGCCGTCGACGCTCTGCGCGCCAGGGGCCTGGCCGCCGCCGCCAAGAAGTCGAGCCGCACTGCGGCTGAAGGTCTTGTAGGCGTTGCCGTGGAAGGCACTCGCGGCGTTGCCGTGGAAGTGAACTCCGAAACCGACTTCGTCGCGAAGAATGATCAGTTCCAGGACTTCGTTCGCAAGACCACTCAGGTTGCCCTGGGCGTGGATAGCGACGATGTGGAATCGCTGAAGGCTGCTGCCTATCCCGATGGCGGCACCGTTGGCGAGAAGCTGACCAACAATGTTGCGACGATTGGTGAGAACCAGCAGGTTCGCCGCATCAAGACCGTTTCGGTCAGCGAAGGCGTAATCGTTCCTTATATGCACAATGCCGTCGCGCCGAGCCTCGGCAAGATCGGCGTGCTCGTGGCGCTCGAAAGCTCGGCTCCCGCCGATGTGCTGGAAGCCCTTGGCAAGCAGCTGGCGATGCACATTGCCGCAGCTTTCCCGCTGGCGCTGAACGCCGATGGCCTTGACCAGGACCTGATCGCTCGTGAGCGTTCCATTGCCGAGGAAAAGGCTGCCGAGAGCGGCAAGCCTGCCGAAGTGCAGGCCAAGATGGTGGATGGCGCGATTGCCAAGTTCGCCAAGGAAAACGCGCTGCTCTCGCAGATCTTCGTCATGGACAACAAGACCCCGATCCAGCAGGTCGTCGATCAGGCCGGCAAGGAAGCCGGCGCCAAGATCGTGCTGAAGGACTATGTCCGCTTCCAGCTGGGCGAAGGCATCGAGAAGGAAGTCAGCGACTTTGCCGCCGAAGTCGCGGCAGCGGCTGGCGTTGCCTGA
PROTEIN sequence
Length: 310
MAAYTAADVKALRERSGAGMMDCKKALDETNGDIEAAVDALRARGLAAAAKKSSRTAAEGLVGVAVEGTRGVAVEVNSETDFVAKNDQFQDFVRKTTQVALGVDSDDVESLKAAAYPDGGTVGEKLTNNVATIGENQQVRRIKTVSVSEGVIVPYMHNAVAPSLGKIGVLVALESSAPADVLEALGKQLAMHIAAAFPLALNADGLDQDLIARERSIAEEKAAESGKPAEVQAKMVDGAIAKFAKENALLSQIFVMDNKTPIQQVVDQAGKEAGAKIVLKDYVRFQLGEGIEKEVSDFAAEVAAAAGVA*