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scnpilot_p_inoc_scaffold_8997_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 2075..2434

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKG0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 223
  • Evalue 1.10e-55
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 223
  • Evalue 1.50e-55
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 119.0
  • Bit_score: 216
  • Evalue 3.80e-54

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCCCGTATTAAACGCGGCGTTACCACGCGCGCAAAGCACAAGCGGATTCTGGACGCGGCCAAGGGCTTTCGCGGCCGCCGCAAGAACACCATCCGCGTTGCCCGTCAGGCAGTCGAAAAGGCCGGCCAGTACGCTTATCGCGACCGCAAGGTTAAGAAGCGGAACTTCCGTGCCCTGTGGATTCAGCGCATCAATGCTGCTGTCCGCGCCGAAGGCCTGACCTATTCGCAGTTCATCCACGGCACCAAGCTTGCCGGGATCGAGCTGGACCGCAAGGTGATGGCCGATCTGGCCATGAACGAAGGCGCTGCCTTCGCCGCGATCATCGCGCAGGCGAAGAAGGCTCTTCCGGCCTGA
PROTEIN sequence
Length: 120
MSRIKRGVTTRAKHKRILDAAKGFRGRRKNTIRVARQAVEKAGQYAYRDRKVKKRNFRALWIQRINAAVRAEGLTYSQFIHGTKLAGIELDRKVMADLAMNEGAAFAAIIAQAKKALPA*