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scnpilot_p_inoc_scaffold_8861_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 3334..3708

Top 3 Functional Annotations

Value Algorithm Source
CopG-like DNA-binding protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSC5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 120.0
  • Bit_score: 201
  • Evalue 4.70e-49
CopG-like DNA-binding protein {ECO:0000313|EMBL:EJU10301.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 120.0
  • Bit_score: 201
  • Evalue 6.50e-49
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 124.0
  • Bit_score: 185
  • Evalue 7.50e-45

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGACCCGCATCCTCGCCGATTTGCCCGATGACGACATCAAGTGGCTCGATGCCCGCGCAGCCGAGCAGGGAAAGTCGCGCGCGTCGGTGCTGCGCGAGGCGGTCGCGACTTATAAGGCTCAGTCACAGCCTTCGAGCGACAAGAGCTGGCTCGATCAGGCCTTCGGTATCTGGAAGGATCGCCCGGATATCGAGGATTCCGTCGATTGGCAGCGGCGCGAGCGGGCTTCGTGGACACGGCCATGGGATGACGATTACGAAGAGGTGAGGGCAGAGTTCCCTGACCTGTTCGACGAAAATGACGACCGCGAGCGGGAGCGTTATCTGGCGATGGCAAAGGGCGCGAAACCCGAGCAGAAACCTTCCGTTCCGTGA
PROTEIN sequence
Length: 125
MTRILADLPDDDIKWLDARAAEQGKSRASVLREAVATYKAQSQPSSDKSWLDQAFGIWKDRPDIEDSVDWQRRERASWTRPWDDDYEEVRAEFPDLFDENDDRERERYLAMAKGAKPEQKPSVP*