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scnpilot_p_inoc_scaffold_9356_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2993..4912)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase HrpB {ECO:0000313|EMBL:AKH41917.1}; EC=3.6.4.13 {ECO:0000313|EMBL:AKH41917.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryth similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 634.0
  • Bit_score: 870
  • Evalue 1.30e-249
ATP-dependent helicase HrpB n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INH6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 643.0
  • Bit_score: 840
  • Evalue 1.00e-240
ATP-dependent helicase HrpB similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 643.0
  • Bit_score: 840
  • Evalue 2.90e-241

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1920
TCCGCCATCCTTGCCGCATGGCGTGAGGAACAGGGCGATATTCTGGCCTTTCTGCCCGGCGTTGGCGAGATTGAACGCACGCGGGAGCGGCTGGCCGAAAAACTGCCTAATGTCCCGATCCTGCCGCTGCACGGACAGGTCGAGCCGCAAGGGCAGCGCATGGCTATCAAGCGCGATGCCGAGGGACGCCGCCGGATTGTGCTGGCCACTTCCATCGCGGAAACCTCGCTCACGCTGGATGGCGTTTCGGTCGTCGTCGATTGCGGGCTGGCGCGGCGGGCAGAATTCGATCTGGCGGCGGGCGTGACGCATCTTGTCACCACGCGGGCCAGCCAGGCATCCGCCGCCCAGCGCGCGGGCCGTGCGGCTCGGCAAGGGCCGGGCGTGGCCTATCGTTTGTGGGAAGAAGGCGCCCATGCCGGGCGGCCTGCCTTCGATCCGCCGGAGATGCTGACGGCAGACCTCGCCCCGCTGGTTCTGGCTTTGGCCCAATGGGGCGCTGGCGATCCGGCGGCGATGGCCTGGATCGATCCGCCGCCCGCCGCCGCGCTTTCTGCCGCGCGTGGGCGCCTTGCAGCGCTGGGGGCGCTCGACGGGGAAGGGCGGATTACCGAGTTCGGGCGCAAGCTGGCCCAATTGCCGATGGAGCCGCCGCTCGCCGCCATGGTGCTGTTCGGCGCAGAGGCCGGCGATGCGCGTGGGGCAGCGCGACTGGCCTTGCTGCTGCAGGAGCGCGGGTTTGGCGGGCGTAGCGAGGATCTGGCGCAACGCCTGTCACGTTGGAACGGGGACCGTTCGCCCCGCGCGGAGGCGTCGCGCAAGCTGGCGGATGGCTGGGCTAAGCGGGCATTGGCGCTCACGAAAACCACAGCCGCTCAGCCTGAGCTTGTCGAAGGCCATGCGAAGGTCGCCGCCTCAAGCTCGAACGACGGCGCGCGTCCTTCGACAGGCTCAGGACGATCGGAGGGTGTGGATCTGGGTGTCCTCCTAGCCCGTGCCCTGCCGGACAATCTCGCCCGCCGCCGCGATGCTTCGGGCGAAAGCTGGATCAGCGCGGGCGGGCGGGGATACACGCTCGATCCCGCATCCCCGCTGGCGCGGGCGGAATGGCTCGCCATCGGCGATGCGCAGGGCAGGGCGCAGGCCGCGCGGATCACCGCCGCATGGCCGCTCACTTCGGAGGAAGTGGAGCGCGACCTTGCCCGTCTGATCCAGCGGCGCTCCACCCTCAACTGGAATGCGGCGGAAGGCCGGGTGGAGGCTCGGCTGGAGCGGCGGCTGGGCGCGATCACGCTCGCTAGCGGTCCCGATCCGAAGCCGGACCCCTTGGCGGTTGCTGCCATGCTTGTGGATAAGGCTCGGGAAAAGCTGGCGGATATCCTGCCGAAAACCCTGATCGCCCGCGCCCGCCATGCCGGGCTGGAGGCGCTTTCGCTGGAAGTGCTGGCAGAAGAAGCGGAGGACTGGCTGCCCCCCTTGCTGGAAAAACGCCGCGATCTCGATCTGCCCAAAGGACCGCTGACCGAGGCGCTGCTCAACCGGCTGGACTGGGATTCGCGCCAGAAGCTCGACCGGCTGGCCCCGCGCGAATGGACCAGTCCCGCAGGCACACATCATTCCATCGATTATGATGCCGATGGCGGCCCCAGCGTGGAAGTGCGGGTGCAGGCTCTGTTCGGTCTCGACCGGCACCCGATGATTGGCCAGCCACCGCAGCCCTTATTGCTCCAACTCACCAGCCCCGGCGGGCGCCCGGTTCAGGCCACGCGCGATCTCCCTGCGTTCTGGCGCGGCAGTTGGCGCGATGTGGTCAAAGACATGAAGGGCCGCTATCCCAAACATCGGTGGCCGGACGAACCCTGGGCCGAAGCGCCCAGCCTGAAGACAAAGAACGCCTTCAACGCAGCAACGCGCACTTGA
PROTEIN sequence
Length: 640
SAILAAWREEQGDILAFLPGVGEIERTRERLAEKLPNVPILPLHGQVEPQGQRMAIKRDAEGRRRIVLATSIAETSLTLDGVSVVVDCGLARRAEFDLAAGVTHLVTTRASQASAAQRAGRAARQGPGVAYRLWEEGAHAGRPAFDPPEMLTADLAPLVLALAQWGAGDPAAMAWIDPPPAAALSAARGRLAALGALDGEGRITEFGRKLAQLPMEPPLAAMVLFGAEAGDARGAARLALLLQERGFGGRSEDLAQRLSRWNGDRSPRAEASRKLADGWAKRALALTKTTAAQPELVEGHAKVAASSSNDGARPSTGSGRSEGVDLGVLLARALPDNLARRRDASGESWISAGGRGYTLDPASPLARAEWLAIGDAQGRAQAARITAAWPLTSEEVERDLARLIQRRSTLNWNAAEGRVEARLERRLGAITLASGPDPKPDPLAVAAMLVDKAREKLADILPKTLIARARHAGLEALSLEVLAEEAEDWLPPLLEKRRDLDLPKGPLTEALLNRLDWDSRQKLDRLAPREWTSPAGTHHSIDYDADGGPSVEVRVQALFGLDRHPMIGQPPQPLLLQLTSPGGRPVQATRDLPAFWRGSWRDVVKDMKGRYPKHRWPDEPWAEAPSLKTKNAFNAATRT*