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scnpilot_p_inoc_scaffold_9444_5

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 2366..2956

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI02_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 196.0
  • Bit_score: 262
  • Evalue 4.60e-67
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 196.0
  • Bit_score: 262
  • Evalue 6.40e-67
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 196.0
  • Bit_score: 254
  • Evalue 2.70e-65

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGCCGATATTGCGCGCCTTGTTGAAGTGATCGAGCCCGAGGCGAAAGCCCTGGGGTTTGATCTCGTGCGCGTGAAGATCATTGGCGCCGAAGCTGGCGAGGGGGAGCCCGCGCTGCAGATCATGGCGGAAGACCCGGCGACCGGGCAGCTTGTGATCGAGCAATGCGCCGAGCTTTCCCGCCGTGTTTCGGACCGTATGGACGAACTGGAGGAAGCGGGCGAAGTGCTGGTGGAAGGCGCCTATCGCCTGGAAGTCAGCTCGCCCGGCATCGACCGGCCGCTTACCCGGCCCAAGGATTTCGCCAATTGGGCGGGGCACGAAGTGCGCATTGCCCTGGCCGAGGCGATCCATGGCGAGGATGGAAAGCCGCGCAAGACGGTGAAGGGCGATCTGGCCGGAATCGAAGGCGATATCGTCACGGTGGACGATGCCAAGGTCGGCCGGGTGCAATTCCCGCTGGAACTCATTCATTCGGCAAAGCTTGTCCTTACCGACAGGCTGATTGCCGCAACCCGCCCGCTTGACACTTCCGGCGCAGAGGAAGTGGAAGAAGGCGCAGACGAATTTCTCGAAGAAGAGGAAGGCTGA
PROTEIN sequence
Length: 197
MADIARLVEVIEPEAKALGFDLVRVKIIGAEAGEGEPALQIMAEDPATGQLVIEQCAELSRRVSDRMDELEEAGEVLVEGAYRLEVSSPGIDRPLTRPKDFANWAGHEVRIALAEAIHGEDGKPRKTVKGDLAGIEGDIVTVDDAKVGRVQFPLELIHSAKLVLTDRLIAATRPLDTSGAEEVEEGADEFLEEEEG*